Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3799 342 6e-89 seq3792 168 8e-37 seq2503 132 6e-26 >seq3799 Length=82858 Score = 342 bits (378), Expect = 6e-89 Identities = 754/1122 (67%), Gaps = 14/1122 (1%) Strand=Plus/Minus Query 62729 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 62788 |||||||| || || || | ||| |||| |||||||| || || |||| | Sbjct 43819 ATTACAAAAGTGGGTAAAGCGATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGGCTT 43760 Query 62789 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 62848 | ||||| | || || || ||||| |||||||| || ||||| || || |||||||| Sbjct 43759 GTATATTCGACAATTTCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGTTGG 43700 Query 62849 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 62908 || |||||| | ||||| |||||||| || || || || || |||| |||||| | || Sbjct 43699 TTGCTCTTTCTATTACAAGCATCCTTGTAGAGCATAAACGGGTTACCGGTTTCAGTTTGT 43640 Query 62909 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT--TT 62966 | ||| | || || | ||| | | | ||||| ||| | | | | ||||| || Sbjct 43639 GCTTCCAAGATAGCATACCATAACTTTTGTGCCTTAATTGTC--TCTCTCGCTCTTCCTT 43582 Query 62967 CTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAG 63026 | | ||| || | ||| | | | ||||| || |||||||||| | || |||| Sbjct 43581 CGCGTTCATAGCTTTCATAAAGAGCTACAAACTCATCACCCCAAACATCTTGCAAACCAG 43522 Query 63027 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63086 | ||||| ||||| | | ||||| || || | ||||| || |||| ||| |||| Sbjct 43521 GTGCTTCATTAGGACAAAAGAGAGACCAATCCCCACCGTCCTTGACACGTTGCATGAAGA 43462 Query 63087 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63146 |||| || | |||||| || ||| | ||| | || ||| ||| || || || | Sbjct 43461 GATCGGGTACCCAAAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGT 43402 Query 63147 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63206 ||||| | | ||| | || | | ||||| | |||||| || || | || ||||| | Sbjct 43401 TCTTTCTTAAATCTAAAAAGGTAAAGATATCCGCATGCCATGGCTCAAGATACATGGCGA 43342 Query 63207 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63266 |||| || || ||||| || || ||||| | || | || |||||||| | || | Sbjct 43341 AGGCTCCCGGACGCTTGTTGCCACCTTGATCGACATAACGTGCTGTGTTATTGAACACAC 43282 Query 63267 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGG 63326 || ||| |||| | |||||| || |||||| || || | |||||| |||| ||| Sbjct 43281 GCAGCATGGGAAGCAAACCATTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGG 43222 Query 63327 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 63386 |||||||||| ||| ||||| || || ||||| |||| || ||| || || Sbjct 43221 CACGAATATTGTGAATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGA 43162 Query 63387 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 63446 |||||| || ||||||||||| || || ||| ||| ||||| | || | || || Sbjct 43161 TTTTTAATGTTTCATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAG 43102 Query 63447 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACC 63506 ||||| || ||||| || || ||||| || || || ||| || |||||||| Sbjct 43101 AGGACATCTGAGGACGAGGTGTACCGGCATTGAACAAAGTGGGACTGGCATGAGTAAAGA 43042 Query 63507 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATT 63565 |||| ||||| | | ||||| |||||||| || | ||| ||||| || | || || Sbjct 43041 ATTTCTCAGACATCAAGTTGTAAGTCTCAATTGCAGCGTCAATATCTTCACCG-TGGATA 42983 Query 63566 CCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63623 || | ||||||||||| ||| |||| ||||| | || | ||||| || || | Sbjct 42982 CCAATAGCGACACGCATGATAAGATGT--TGAGGACGCTCGGCAGTCTTGCCGTCAATCT 42925 Query 63624 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 63681 | | | |||||| ||| | ||| || || |||||| ||||||| ||||| |||| Sbjct 42924 TGAGTAGATAGGATCGTTCGAGAGTCTTGAATCCAAAAAAGTTGTACTTGAAA--TCTCT 42867 Query 63682 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT 63741 || |||||||| | ||||| || || | | | ||| || | ||| | Sbjct 42866 GTCATAAATAATGGCTGAGTTCAGACGTTCTGCGTTGTCCTGAACAACTTTATAGGTTGT 42807 Query 63742 ACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTC 63801 || || || || ||||||| | || ||||| ||||||||| | | |||||| Sbjct 42806 GTCGGATATCATGGGGGAATGTTTGTTTGTCTTGGGATTTACATAGTTGTAGAGATCCTC 42747 Query 63802 CATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 63843 ||||||| | ||| | || |||||||| ||||||| ||| Sbjct 42746 AATCACTTGAGAAAAGACCTTCTTTGTTTCCTTGTGTAAATT 42705 Score = 172 bits (190), Expect = 7e-38 Identities = 532/822 (65%), Gaps = 21/822 (3%) Strand=Plus/Minus Query 61880 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 61939 ||||| | ||| ||||| ||||| || | || ||| || ||||| |||||||| Sbjct 44732 GTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAGCCATAAAAGTGCATACTT 44673 Query 61940 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 61999 || || || | | | || || || ||| ||| |||| | |||||||||||| ||| Sbjct 44672 GTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAATG 44613 Query 62000 AAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTT 62059 |||| || | ||| || ||||| | | ||| || || | |||||||| | ||| Sbjct 44612 TAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGCTGAGAGATTTCCCAGACAGTC 44553 Query 62060 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGT------ATTCTGAATGGATCCACCA 62113 || || | | || | | || || || |||| ||| || | || |||||| Sbjct 44552 TTGTAGAGTTCTTTGAGGTGTT---GAGGGATTGTGGGTACATTTTGGACAGACCCACCA 44496 Query 62114 TCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTC-TCTCGGTTAAAACTCT 62172 || ||||| ||| | ||||||| ||||| ||||| ||| | | || ||| | | Sbjct 44495 TCGGCCATGATCATGTTCTTGACTTCATCGTTCCA-AATACCCATATCAACCAAATCACG 44437 Query 62173 AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 62232 ||| | || || || | |||| |||| || || | || | || || |||| || Sbjct 44436 AAGTAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTT 44377 Query 62233 ACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 62292 | || || || || | | ||||||| ||||| ||||||| || || || || || Sbjct 44376 AGAAGTGTAAGGCTCAAAACACTCATTGAAACCCAACATTTGAGAGGTAGAGGCGGTAGG 44317 Query 62293 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGG 62352 |||||| || | ||| | ||| | || |||| | || || || ||||| | Sbjct 44316 CATAGGGGCTAACAAAAGTGAATTGCGAACGCCGTGCTTGGCTATCTTTTCCTTTAGTGA 44257 Query 62353 TTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACC--- 62409 |||| | ||||||| | ||| || ||||| || || Sbjct 44256 AGCCCAGTCCCAAAGAGAGGTGGGTGTCACATTCCACATGTCGTATTGTAAGATGCCCTT 44197 Query 62410 -GTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 62468 | ||| || || ||| |||| || || || ||||| | ||| || || | ||| | Sbjct 44196 GGATACAGGACTA----CCTTCATAAGTTTCATAAGGTCCGTACTTTTCGGCCAATTCGC 44141 Query 62469 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCG 62528 | || || |||||| | | ||| || ||||| ||||| | |||||| | || | Sbjct 44140 ATGAGGCTTCCAATGCAGCATGATAGATAGTTTCAAAGATTTGAATATTTAATTGTTTGG 44081 Query 62529 CTTCCAGGCTA-TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 62587 ||| |||| | ||||| || ||| |||| || || | ||||||||| ||||| ||| Sbjct 44080 CTT-CAGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCTGCTAAACCTTGGACA 44022 Query 62588 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 62647 || | ||||||||| | ||||||||| || || |||| ||||| | ||| ||||| Sbjct 44021 CCTAAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAG 43962 Query 62648 TTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTG 62689 || ||||| ||||| || || | ||||| ||| || ||| Sbjct 43961 TTGATATCAATAATCTTGTTCAAGTTTCTAGTAATCACCTTG 43920 >seq3792 Length=31585 Score = 168 bits (186), Expect = 8e-37 Identities = 298/432 (69%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 32385 ACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAAT 32444 ||||| ||||| ||||| || || || |||| | ||| || | ||||| || || || Sbjct 6549 ACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCCATAAAGTCAAAC 6608 Query 32445 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACA 32504 ||||| || | |||||||||| | || || | || || | | ||| || ||| Sbjct 6609 GGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAGACGATCAGCAACA 6668 Query 32505 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 32564 ||||| || ||| ||||| | ||||||| || || | | ||| || | || Sbjct 6669 AATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGCAACAGGTAATGCA 6728 Query 32565 ACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCT 32624 |||| | ||||| ||||||||| || || || |||||||| | || || | Sbjct 6729 TCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATCCTTCACACGTTGT 6788 Query 32625 TCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACC 32683 | || ||| | | || | | || |||||| | ||| || ||||| || ||||| Sbjct 6789 TGGCTAGGTTGTTTACGA-ATGTGAGTAAACAAAAGACAAGCAAAATCCGTATGAAGACC 6847 Query 32684 CTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 32743 ||||| | || ||| ||||| || ||| || | |||||||| | ||||| || || Sbjct 6848 TTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCAAACCACGTTTCTT 6907 Query 32744 AAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803 ||||||||| || || |||||||| ||||||||||| || ||||||||||| ||||| || Sbjct 6908 AAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTCTACTGCAGCAAAAGC 6967 Query 32804 AATAAGTCTCTC 32815 || ||| | ||| Sbjct 6968 AACAAGACGCTC 6979 Score = 138 bits (152), Expect = 1e-27 Identities = 224/322 (70%), Gaps = 3/322 (1%) Strand=Plus/Plus Query 32881 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 32940 |||| || |||||| || || | |||||| | | |||||| | ||| ||||||| Sbjct 7103 TTGTATCAATAGCAGAGAAAAGCATTTCTTTTTCTTCATCATCTTTTATATAGGTATCAA 7162 Query 32941 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGC 33000 |||||||||| || |||| || || || |||||||| |||||||| || || || | Sbjct 7163 TCAAAAGACTGTATGTTTCAGAGTGGATATTTTCAATCATGATTTGAAAGCCATAAAAAC 7222 Query 33001 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 33060 || |||| || | ||| | ||||| |||||| || | ||||||||||| || | Sbjct 7223 ATTTAGCTTCAGGAATTTTGACTTCATCACAAAAATTTTGCACCAAATTTTCATTTACAA 7282 Query 33061 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 33120 | || ||| | ||||| || ||||| ||| | |||||| || || | | Sbjct 7283 TACCATCAGAGCTCGCAAAGAAAGCCAAAACACGAGAAATAAAAAATCGCTCATTCTCAG 7342 Query 33121 TTAGTTTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 33177 | | ||| || ||||||||| ||| || || ||| | |||||| ||||||||| Sbjct 7343 TCATTTTGTTTTCCCAATCATTTTGGTCTCTACTTAAATCTATTTCTTCAGCTGTCCAAA 7402 Query 33178 ATGATGCCTCTGCCTTTTTATA 33199 | ||||| |||||||| ||||| Sbjct 7403 AAGATGCTTCTGCCTTCTTATA 7424 >seq2503 Length=34491 Score = 132 bits (146), Expect = 6e-26 Identities = 553/881 (63%), Gaps = 55/881 (6%) Strand=Plus/Plus Query 32372 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 32431 ||| || ||| ||||| ||||| ||||| || || || |||| | || || | || Sbjct 6832 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 6891 Query 32432 CATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 32491 ||| || |||||||| || | |||| ||||| || | ||| || | | || | Sbjct 6892 CATAAAGTCGAATGGGTTAGAGGCATTGTAAATCTTGTCAAAGCCAAGGGCGACCATGAG 6951 Query 32492 TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 32551 | ||| ||||| ||||| || || ||||| | ||||| || || | | Sbjct 6952 ACGATCAGCGACGAATTCAATGTACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 7011 Query 32552 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 32611 || || ||||| | | || ||||||||||| ||| ||| || ||| ||||| | Sbjct 7012 CACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACTGCTTCTACAATAAT-GT 7070 Query 32612 TCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 32670 ||| || || || ||| ||| | | | || | |||| | ||| || |||| Sbjct 7071 CCTTGACGCGTTGTTGACTGGGTTGTTTGCGGATGTGGGTGAACAAGAGACAGGCAAAAT 7130 Query 32671 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 32730 || ||| ||||| ||||| | || || ||||| || ||||| | |||||||| | Sbjct 7131 CGGTGTGAAGACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGCATCA 7190 Query 32731 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 32790 ||||| || || | |||||| ||||| || ||||| || |||||||| || ||||| | Sbjct 7191 AACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCTTCGA 7250 Query 32791 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG-TATCCACTTTTGA 32849 | || |||||||| | || | || || | || || ||| ||||| || | Sbjct 7251 CAGCGGCAAAGGCGACCAGACGTTCAGCAAAGGATTCGTTG-GATGAGATCCATTTGAAA 7309 Query 32850 GCCCAATCGGCCTTCTTTTTTACACAAGGCA----------------------------- 32880 |||||||||||||| || | ||| || | Sbjct 7310 GCCCAATCGGCCTTACGCTTAATACAGGGAACTAGAAGAGAGATGAATACGATATCGAAT 7369 Query 32881 -------------------TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTA 32921 | || || |||||| |||||| | ||||| | || Sbjct 7370 GGGGATCGATTGTACTTACTGGTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGGTTA 7429 Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981 ||||||| || ||||||||||| ||||| || |||| | ||| ||||||||||| Sbjct 7430 TCTTTAATGTAGGTATCAATCAAGAGACTGTAAGTTTCAGCATGGATGTTTTCAATCATG 7489 Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT 33041 || || || || || || || | || |||| ||||| ||||| |||||| || | Sbjct 7490 ATCTGGAAACCATAAAAACACTTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTTGT 7549 Query 33042 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 33101 | || ||||||||||| || || || | | ||||| || ||||| ||| | ||| Sbjct 7550 ACCAAGTTTTCATTCACGATACCATCTGAGCCAGCAAAGAAGGCCAAGACACGCGAGATA 7609 Query 33102 AAATATTTTTCG---TCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCC 33158 || | |||| |||| || || | |||||||| ||| || | || Sbjct 7610 AAGAAACGTTCGTTCTCTGACATTTTGTTTTCCCAATCATGCTGATCCTTGCTCAAGTCA 7669 Query 33159 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33199 | ||||| | |||||||| || || || ||||||||||| Sbjct 7670 ATCTCTTCTGCGGTCCAAAAGGAAGCTTCGGCCTTTTTATA 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633600944111600