Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2423 145 7e-30 >seq2423 Length=40535 Score = 145 bits (160), Expect = 7e-30 Identities = 387/588 (66%), Gaps = 25/588 (4%) Strand=Plus/Minus Query 20190 TGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGG-TCTAAGACCAGTAACA 20248 |||| | || | ||| |||| || || ||||| || || || || || | || || Sbjct 23362 TGTAAACATGTGTATCACCCATAGTATGTATAAATTCTCCAGGATCCAA-ATTTGTTACG 23304 Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || |||| ||| ||| ||||| | |||| ||||| |||||||| || || || ||| Sbjct 23303 TGTGCAATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAAAAGGTACACCTAACCCC 23244 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCT---------CACCGTC---AGCT 20356 || || | || | |||||| ||| ||| || || | |||| || || | Sbjct 23243 ATATCGCAAGATCGCTGATAAAGCACACAAGATAGTTTAGCACGTCCACCATCTGAAGGT 23184 Query 20357 ---------ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAG 20407 |||||||| ||||| || ||||| || || | ||||| | | | Sbjct 23183 GGGTTGGAAACATAAAACTGACAAAAAGCATGACAAGGAGGTAAAGCCATAATAGGAATA 23124 Query 20408 TCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAA 20467 || || || ||||| ||| | | ||| |||| |||||| ||||||||||| || | Sbjct 23123 TCTGCAGGATTCCAGGCAGAGAGAATAATTCGTCTATCTGTTGGATTATTTTTAATGGTA 23064 Query 20468 TCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACG 20527 || | | | | ||||| |||| || || || ||||||||| ||| || ||| Sbjct 23063 TCTATCACTTGCTGTAATTGATCAATGCCTTGACCACTATAGTCAGTATCGCAATCAACG 23004 Query 20528 TACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTT 20587 ||| ||||||||||| ||||||||||| || || || || || | ||| || || | Sbjct 23003 TACTTGGCCCCAAAGTGTCTCCACTGGAACCCATAGACTGGACCAAGATCACCTTCTCGG 22944 Query 20588 CTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTG 20647 | || | ||||| || | |||||||| | |||||||| ||||| |||||| Sbjct 22943 CGATGAGTAAGGCCCAGCTTATCAAGGAACTCACGAGAGCCATTGCCATCCCAGATCTTG 22884 Query 20648 AC-TCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTC 20706 || | | || | ||| | | |||| |||| ||||| | ||||||||| || || Sbjct 22883 ACATTACGCTCATTCAAG-TGTTTTGAGTTAGTATCACCCTTGATAAACCAAAGAAGTTC 22825 Query 20707 TTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAA 20754 || | || |||| | || || ||||||||||| || | ||||| Sbjct 22824 TTCGAGAACACCTCTAAAGAATACACGCTTTGTGGTGAGGAGAGGAAA 22777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441351167215640