Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3789 86.0 5e-12 seq2672 82.4 6e-11 >seq3789 Length=135228 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 33898 AAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCT 33957 ||||| || | || || || |||| || || ||| ||||| ||||||||||| || Sbjct 104635 AAACCACCACGAAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCA 104576 Query 33958 GCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACC 34017 ||| || | || || | ||||| || ||||| |||| || || ||||| Sbjct 104575 CTCAAAGTACGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGA 104516 Query 34018 GGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCAC-ACTATCAGTAGATTC 34076 || | | || ||||| ||||||||||| | |||| |||||||| ||||| Sbjct 104515 GGAATACCTTCCTTGTCTTGGATTTTTTGCTTGACATT-CTCAATACTATCAGAGGATTC 104457 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 | || | || ||||| || || || |||||||| ||||||||||||||||| Sbjct 104456 GACCTCCAAAGTGATTGTCTTGCCAGTAAGTGTTTTAACAAAGATTTGCATTTT 104403 >seq2672 Length=76086 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || | || ||||||||||| || || || ||||| || || || | Sbjct 17843 ACCACCTCGTAGTCTTAGTACCAGATGAAGGGTTGATTCTTTTTGAATATTATAGTCA-C 17901 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || || || | || |||||||| ||||| ||||| || || || || ||||| | Sbjct 17902 TAAGGGTACGGCCATCTTCCAATTGTTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTG 17961 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGC 34078 | | | ||||| || || |||||||| | | | |||||||| |||||| Sbjct 17962 GGATACCTTCTTTATCTTGGATCTTTTGCTTTACGTTGTCAATACTATCAGAAGATTCAA 18021 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | || || ||||| || || || || ||||||||||||||||| Sbjct 18022 CTTCCAAAGTAATAGTTTTACCAGTAAGAGTCTTCACAAAGATTTGCAT 18070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397043425504642