Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3789 98.7 1e-15 seq2672 98.7 1e-15 seq636 96.9 4e-15 seq2288 95.1 1e-14 seq547 95.1 1e-14 seq3247 93.3 5e-14 seq1996 87.8 2e-12 seq1978 87.8 2e-12 seq3880 86.0 7e-12 seq3100 86.0 7e-12 seq3075 86.0 7e-12 seq1971 86.0 7e-12 seq737 86.0 7e-12 seq691 84.2 2e-11 >seq3789 Length=135228 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| ||||||||||| ||||| ||| || ||| || | || || Sbjct 104614 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCA 104555 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||||||||| || || | || || || || | || | | |||||||| | Sbjct 104554 AGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGG 104495 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 |||||||| |||| || | | | || ||||| || || | ||||| || ||| Sbjct 104494 ATTTTTTGCTTGACATTCTCAATACTATCAGAGGATTCGACCTCCAAAGTGATTGTCTTG 104435 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || || || || || ||||||||||||||||| Sbjct 104434 CCAGTAAGTGTTTTAACAAAGATTTGCATTTT 104403 >seq2672 Length=76086 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||||||| || |||||||| | || || ||||| |||||||||||| Sbjct 17616 CCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACTT 17675 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | ||| || | || || || || |||||||| || || |||| ||||| || | ||| Sbjct 17676 AAAGTACGACCATCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGCTGATCTGGTGGG 17735 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||||| || ||||| ||| | | | | || ||| ||||| || Sbjct 17736 ATACCTTCCTTATCTTGAATTTTGCTTTTCACATTATCAATAGTATCGGAGGATTCAACT 17795 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| || ||||| || || ||||| |||||||||||||| Sbjct 17796 TCTAATGTGATTGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 17842 >seq636 Length=685 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 56997 GAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| | ||||| ||| | ||| |||||| ||||||||||||||||||||| ||| Sbjct 462 GAAAAAATCTCTCC--GGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 519 Query 57057 CTCACCACTATACTACCGAGGATTG 57081 ||||||||||||||||||| ||||| Sbjct 520 CTCACCACTATACTACCGAAGATTG 544 >seq2288 Length=1986 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 || ||| | |||||| |||| | ||| |||||| ||||||||||||||||||||| | Sbjct 429 ATCAAACAATTTCTCTCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 488 Query 57055 TACTCACCACTATACTACCGAGGAT 57079 ||||||||||||||||||||| ||| Sbjct 489 TACTCACCACTATACTACCGAAGAT 513 >seq547 Length=2492 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/81 (86%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| ||||| ||| | ||| |||||| ||||||||||||||||||||| |||| Sbjct 479 AAAAATTCTCTCC--GGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 422 Query 57058 TCACCACTATACTACCGAGGA 57078 |||||||||||||||||| || Sbjct 421 TCACCACTATACTACCGAAGA 401 >seq3247 Length=733 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||||| |||| | ||| |||||| ||||||||||||||||||||| |||| Sbjct 229 AAAAACATTCTCTCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 170 Query 57058 TCACCACTATACTACCGAGGA 57078 |||||||||||||||||| || Sbjct 169 TCACCACTATACTACCGAAGA 149 >seq1996 Length=4092 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 3318 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 3377 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 3378 CCGAAGAT 3385 >seq1978 Length=1053 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 492 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 551 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 552 CCGAAGAT 559 >seq3880 Length=130811 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||||||| || |||||||| | ||| |||||||| ||||| ||||| Sbjct 118852 CCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATAATCGCTT 118793 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || | || ||||| || || ||||| || || |||| || || || | ||| Sbjct 118792 AATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 118733 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || ||||| ||||| ||| | | | | || ||| ||||| || Sbjct 118732 ATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAAGATTCAACT 118673 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| |||||||| || || ||||| || || |||||||| Sbjct 118672 TCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACGAATATTTGCAT 118626 >seq3100 Length=5352 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 4847 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 4906 Query 57072 CCGAGGA 57078 |||| || Sbjct 4907 CCGAAGA 4913 >seq3075 Length=4197 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 1877 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 1936 Query 57072 CCGAGGA 57078 |||| || Sbjct 1937 CCGAAGA 1943 >seq1971 Length=1319 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 629 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 688 Query 57072 CCGAGGA 57078 |||| || Sbjct 689 CCGAAGA 695 >seq737 Length=1285 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 925 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 866 Query 57072 CCGAGGA 57078 |||| || Sbjct 865 CCGAAGA 859 >seq691 Length=893 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 517 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 458 Query 57072 CCGAGGATT 57080 |||| |||| Sbjct 457 CCGAAGATT 449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543186175782640