Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2543 116 4e-21 seq175 116 4e-21 seq2503 100 3e-16 seq3880 89.7 5e-13 seq2672 89.7 5e-13 >seq2543 Length=10996 Score = 116 bits (128), Expect = 4e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || ||||||||||| ||||| || | | Sbjct 1014 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 955 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||| ||||| ||||||| || || ||||||||||| Sbjct 954 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 895 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || || ||||||| | || | | | || | | |||||| Sbjct 894 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACT 835 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAT 127120 || | || | || || ||||| ||||| |||||||| || |||||| |||| Sbjct 834 TCTAAAGTGATAGTCTTTCCGGTAAGAGTCTTTACAAAGATTTGCATGCTTTAT 781 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || ||||||||||| ||||| || | | Sbjct 1242 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1183 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||| ||||| ||||||| || || ||||||||||| Sbjct 1182 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 1123 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || || ||||||| | ||| | | || | | ||||||| Sbjct 1122 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1063 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||||| || || || || || || ||||||||||| Sbjct 1062 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || ||||||||||| ||||| || | | Sbjct 1926 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1867 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||| ||||| ||||||| || || ||||||||||| Sbjct 1866 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 1807 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || || ||||||| | ||| | | || | | ||||||| Sbjct 1806 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1747 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||||| || || || || || || ||||||||||| Sbjct 1746 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1700 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || ||||||||||| ||||| || | || || || ||| || Sbjct 2136 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 2077 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| ||||| ||||||| || || ||||||||||| || || |||||||| Sbjct 2076 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 2017 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||||| | ||| | | || | | ||||||||| | ||| | ||||| Sbjct 2016 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1957 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || ||||||||||| Sbjct 1956 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1928 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || ||||||||||| ||||| || | | Sbjct 1698 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1639 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||| ||||| ||||||| || || ||||||||||| Sbjct 1638 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 1579 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || || ||||||| | || | | | || | | |||||| Sbjct 1578 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACC 1519 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| || ||||| || ||||| ||||| Sbjct 1518 TCCAAAGTGATAGTCTTTCCGGTAAGTGTTTTGACGAAAATTTGCAT 1472 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || || |||||||| |||||||| || Sbjct 1470 CCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAA 1411 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| |||| ||||| ||||| | || | ||||| || || ||||| Sbjct 1410 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGG 1351 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| |||||||| || || ||||||| | ||| | | || | | ||||||| Sbjct 1350 ATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1291 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||||| || || || || || || ||||||||||| Sbjct 1290 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1244 >seq175 Length=1843 Score = 116 bits (128), Expect = 4e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || ||||||||||| ||||| || | | Sbjct 1014 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 955 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||| ||||| ||||||| || || ||||||||||| Sbjct 954 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 895 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || || ||||||| | || | | | || | | |||||| Sbjct 894 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACT 835 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAT 127120 || | || | || || ||||| ||||| |||||||| || |||||| |||| Sbjct 834 TCTAAAGTGATAGTCTTTCCGGTAAGAGTCTTTACAAAGATTTGCATGCTTTAT 781 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || ||||||||||| ||||| || | | Sbjct 1470 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1411 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||| ||||| ||||||| || || ||||||||||| Sbjct 1410 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 1351 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || || ||||||| | || | | | || | | |||||| Sbjct 1350 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACC 1291 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| || ||||| || ||||| ||||| Sbjct 1290 TCCAAAGTGATAGTCTTTCCGGTAAGTGTTTTGACGAAAATTTGCAT 1244 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || || |||||||| |||||||| || Sbjct 1242 CCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAA 1183 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| |||| ||||| ||||| | || | ||||| || || ||||| Sbjct 1182 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGG 1123 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| |||||||| || || ||||||| | ||| | | || | | ||||||| Sbjct 1122 ATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1063 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||||| || || || || || || ||||||||||| Sbjct 1062 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || || |||||||| |||||||| || Sbjct 1698 CCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAA 1639 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| |||| ||||| ||||| | || | ||||| || || ||||| Sbjct 1638 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGG 1579 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| |||||||| || || ||||||| | ||| | | || | | ||||||| Sbjct 1578 ATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1519 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||||| || || || || || || ||||||||||| Sbjct 1518 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1472 >seq2503 Length=34491 Score = 100 bits (110), Expect = 3e-16 Identities = 299/456 (66%), Gaps = 9/456 (2%) Strand=Plus/Minus Query 47133 GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCG 47192 || |||||| || |||| || ||| ||||| ||| ||||||| || || || || Sbjct 7278 GCTGAACGTCTGGTCGCCTTTGCCGCTGTCGAAGGCATCTTCTTTTCCGGTTCATTCGCC 7219 Query 47193 GCGATATTTTACATGAAAACCAAAGGAGTT--ATGCCCGGCCTCACGTTTAGCAACGAGC 47250 | || |||| | || | || | ||| |||||||| | ||||| || || || Sbjct 7218 TCCATCTTTTGGTTAAAGA--AACGTGGTTTGATGCCCGGTTTGACGTTCAGTAATGAAT 7161 Query 47251 TAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAG 47310 | |||| | |||||||| || |||||| | ||||||||||||| | || | | | Sbjct 7160 TGATCTGTCGTGACGAAGGTCTTCACACCGATTTTGCCTGTCTCTTGTTCACCC--ACAT 7103 Query 47311 TCGATCAAAAGTTGGACGTGCCCAC-CGTCAGCGACATGTTTGCCGAAGCCGTCGCCATT 47369 || | || | | | || ||||| ||||| ||| ||||| |||| || Sbjct 7102 CCGCAAACAACCCAGTCAA--CAACGCGTCAAGGACATTATTGTAGAAGCAGTCGGTATC 7045 Query 47370 GAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATG 47429 || || || | | || |||||||| | | || | || |||||||| || Sbjct 7044 GAACAAGAATTCCTGTCGGATGCTCTGCCTGTGGCATTGATCGGTATGAACGCTACCTTG 6985 Query 47430 ATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAG 47489 ||| | ||||||| ||||| ||||| || || || | || || | | |||| Sbjct 6984 ATGTGTCAGTACATTGAATTCGTCGCTGATCGTCTCATGGTCGCCCTTGGCTTTGACAAG 6925 Query 47490 ATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACC 47549 |||||| | || || |||||||| |||||| ||| || || || | ||||||||| Sbjct 6924 ATTTACAATGCCTCTAACCCATTCGACTTTATGGACATGATCTCCCTTCAAGGCAAGACC 6865 Query 47550 AACTTTTTCGAGAAGCGCGTCGGCGAATATAAACGT 47585 |||||||| || ||||| || || ||| ||||| Sbjct 6864 AACTTTTTTGAAAAGCGTGTTTCTGATTATCAACGT 6829 >seq3880 Length=130811 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| ||||||| | ||| ||||| | || || || ||||||||||| || || | Sbjct 118624 CCACCTCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTATAGTCACTG 118565 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| |||| ||||| ||||| | || | || || ||||| ||||| Sbjct 118564 AGAGTACGACCATCCTCTAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCAGGAGGA 118505 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||| || || || ||||| | | |||| | || | | || ||| Sbjct 118504 ATGCCTTCCTTATCTTGAATCTTTTGCTTTACGTTATCGATACTATCAGAAGATTCAACT 118445 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || || || || |||||||| ||||| Sbjct 118444 TCTAAAGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTGCAT 118398 >seq2672 Length=76086 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | ||| || || |||||||| | ||| || |||||||| ||||||||||| | Sbjct 17615 TCCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACT 17674 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| ||| || || ||||| ||||| | || | || |||||||| || || Sbjct 17675 TAAAGTACGACCATCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGCTGATCTGGTGG 17734 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC--TTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || ||||| | | ||| ||| ||| || | | || | || || | || Sbjct 17735 GATACCTTCCTTAT-CTTGAATTT-TGCTTTTCACATTATCAATAGTATCGGAGGATTCA 17792 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | || | || ||||| || ||||| || ||||| || ||||| Sbjct 17793 ACTTCTAATGTGATTGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 17842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475477494517040