Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2543 118 2e-21 seq175 118 2e-21 seq2895 105 2e-17 seq3880 102 2e-16 seq2672 102 2e-16 seq3850 96.9 8e-15 >seq2543 Length=10996 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | |||||||||| |||||| Sbjct 1008 CGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTA 949 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || || || || || ||||| | ||| || || || ||| ||| ||| Sbjct 948 CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCT 889 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || || | | | || | | ||| || || || Sbjct 888 TCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACTTCTAAA 829 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||| || ||||| ||||| Sbjct 828 GTGATAGTCTTTCCGGTAAGAGTCTTTACAAAGATTTG 791 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | |||||||||| |||||| Sbjct 1692 CGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTA 1633 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || || || || || ||||| | ||| || || || ||| ||| ||| Sbjct 1632 CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCT 1573 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || || | | | || | | || || ||||| Sbjct 1572 TCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAA 1513 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||| || |||||||| Sbjct 1512 GTGATAGTCTTTCCGGTAAGTGTTTTGACGAAAATTTG 1475 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||| ||||| || || ||||| | |||||||||| |||||| Sbjct 2148 CGAAGACGAAGGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTA 2089 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || || || || || ||||| | ||| || || || ||| ||| ||| Sbjct 2088 CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCT 2029 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| ||| ||| | | || | | || || ||||| Sbjct 2028 TCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAG 1969 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || || || ||||| || Sbjct 1968 GTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTG 1931 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | |||||||||| |||||| Sbjct 1236 CGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTA 1177 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || || || || || ||||| | ||| || || || ||| ||| ||| Sbjct 1176 CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCT 1117 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| ||| ||| | | || | | || || ||||| Sbjct 1116 TCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAG 1057 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || || || ||||| || Sbjct 1056 GTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTG 1019 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | |||||||||| |||||| Sbjct 1920 CGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTA 1861 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || || || || || ||||| | ||| || || || ||| ||| ||| Sbjct 1860 CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCT 1801 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| ||| ||| | | || | | || || ||||| Sbjct 1800 TCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAG 1741 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || || || ||||| || Sbjct 1740 GTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTG 1703 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | |||||||| || || ||||||| |||||||| | | || Sbjct 1464 CGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTA 1405 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | || || || || || ||||||||||| ||||| ||| || ||| Sbjct 1404 CGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCT 1345 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| ||| ||| | | || | | || || ||||| Sbjct 1344 TCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAG 1285 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || || || ||||| || Sbjct 1284 GTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTG 1247 >seq175 Length=1843 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | |||||||||| |||||| Sbjct 1008 CGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTA 949 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || || || || || ||||| | ||| || || || ||| ||| ||| Sbjct 948 CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCT 889 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || || | | | || | | ||| || || || Sbjct 888 TCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACTTCTAAA 829 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||| || ||||| ||||| Sbjct 828 GTGATAGTCTTTCCGGTAAGAGTCTTTACAAAGATTTG 791 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | |||||||||| |||||| Sbjct 1464 CGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTA 1405 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || || || || || ||||| | ||| || || || ||| ||| ||| Sbjct 1404 CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCT 1345 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || || | | | || | | || || ||||| Sbjct 1344 TCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAA 1285 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||| || |||||||| Sbjct 1284 GTGATAGTCTTTCCGGTAAGTGTTTTGACGAAAATTTG 1247 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | |||||||| || || ||||||| |||||||| | | || Sbjct 1236 CGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTA 1177 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | || || || || || ||||||||||| ||||| ||| || ||| Sbjct 1176 CGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCT 1117 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| ||| ||| | | || | | || || ||||| Sbjct 1116 TCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAG 1057 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || || || ||||| || Sbjct 1056 GTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTG 1019 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | |||||||| || || ||||||| |||||||| | | || Sbjct 1692 CGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTA 1633 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | || || || || || ||||||||||| ||||| ||| || ||| Sbjct 1632 CGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCT 1573 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| ||| ||| | | || | | || || ||||| Sbjct 1572 TCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAG 1513 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || || || ||||| || Sbjct 1512 GTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTG 1475 >seq2895 Length=151278 Score = 105 bits (116), Expect = 2e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || |||||||| | |||||||||| ||| || Sbjct 145901 CGAAGACGGAGAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCACTCAAGGTG 145960 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| || || |||||||| |||||||| || || || ||| ||| ||| Sbjct 145961 CGACCATCTTCCAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATACCT 146020 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCAC 199554 || || |||||||||||||| || Sbjct 146021 TCCTTGTCTTGAATCTTTTGCTTGAC 146046 >seq3880 Length=130811 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| | ||| || || | || ||||| || |||||||| | || |||||| | ||| Sbjct 118619 TCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTATAGTCACTGAGAGT 118560 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||| || | || || || || || |||||||| || || || ||| ||| || Sbjct 118559 ACGACCATCCTCTAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCAGGAGGAATGCC 118500 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || |||||||||||||| ||| |||| | || | | ||| || || || Sbjct 118499 TTCCTTATCTTGAATCTTTTGCTTTACGTTATCGATACTATCAGAAGATTCAACTTCTAA 118440 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || || || || ||||||||||| Sbjct 118439 AGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTG 118401 >seq2672 Length=76086 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| ||||| || || || || || || || || ||||| | || |||||| | || Sbjct 17849 TCGTAGTCTTAGTACCAGATGAAGGGTTGATTCTTTTTGAATATTATAGTCACTAAGGGT 17908 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||||| || || || || ||||||||||| || || || || || || Sbjct 17909 ACGGCCATCTTCCAATTGTTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGGATACC 17968 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || || ||||||||||| ||| || | | || | | ||| || ||||| Sbjct 17969 TTCTTTATCTTGGATCTTTTGCTTTACGTTGTCAATACTATCAGAAGATTCAACTTCCAA 18028 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || ||||| |||||||| ||||| Sbjct 18029 AGTAATAGTTTTACCAGTAAGAGTCTTCACAAAGATTTG 18067 >seq3850 Length=152326 Score = 96.9 bits (106), Expect = 8e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || || |||||||| | ||||||||| |||||| Sbjct 95255 CGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCGCTCAAAGTA 95314 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| | || || |||||||| |||||||| || ||||| ||| ||| ||| Sbjct 95315 CGACCGTCTTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCT 95374 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCAC 199554 || || |||||||||||||| || Sbjct 95375 TCCTTGTCTTGAATCTTTTGCTTGAC 95400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178862373557707