Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2543 114 1e-20 seq175 114 1e-20 seq3880 98.7 1e-15 seq3789 98.7 1e-15 seq3850 89.7 5e-13 seq2895 89.7 5e-13 >seq2543 Length=10996 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || |||||| | | Sbjct 1244 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1303 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || || | | ||||| | || |||| || | ||||| || || || || | ||||| Sbjct 1304 GATAGTATTGAAAACG-TCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCA 1362 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||||| || || ||||| | || || | || ||||| |||||||| Sbjct 1363 ACAGCGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAA 1422 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||| | || || |||||||| || ||| Sbjct 1423 TATCCAAAAAGAATCCACTCTCCATTTGGTCCTTCGT 1459 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || |||||| | | Sbjct 1928 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1987 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || || | | ||||| | || |||| || | ||||| || || ||||| |||| || Sbjct 1988 GATAGTATTGAAAACG-TCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCA 2046 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || ||||| || || || | || || | | |||||||| Sbjct 2047 ACAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAA 2106 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||| ||| | || || || ||||| || ||| | | ||||| Sbjct 2107 CATTCAAAAAGAATCCACTCTTCACTTGGTCCTTCGTCTTCGTGGCGG 2154 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || |||||| | | Sbjct 1016 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1075 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || || | | ||||| | || |||| || | ||||| || || ||||| |||| || Sbjct 1076 GATAGTATTGAAAACG-TCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCA 1134 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || ||||| || || || | || || | | |||||||| Sbjct 1135 ACAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAA 1194 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||| ||| | || || || ||||| || ||| Sbjct 1195 CATTCAAAAAGAATCCACTCTTCACTTGGTTCTCCGT 1231 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || |||||| | | Sbjct 1700 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1759 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || || | | ||||| | || |||| || | ||||| || || ||||| |||| || Sbjct 1760 GATAGTATTGAAAACG-TCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCA 1818 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || ||||| || || || | || || | | |||||||| Sbjct 1819 ACAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAA 1878 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||| ||| | || || || ||||| || ||| Sbjct 1879 CATTCAAAAAGAATCCACTCTTCACTTGGTTCTCCGT 1915 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || || || || ||||| | || |||||| | | Sbjct 1472 ATGCAAATTTTCGTCAAAACACTTACCGGAAAGACTATCACTTTGGAGGTCGAGTCTTCT 1531 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || ||| | | | | || |||| || | ||||| || || ||||| |||| ||| Sbjct 1532 GATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 1591 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | || || ||||| || || || | || || | | ||||||||| Sbjct 1592 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 1651 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||| ||| | || || || ||||| || ||| Sbjct 1652 ATTCAAAAAGAATCCACTCTTCACTTGGTTCTCCGT 1687 >seq175 Length=1843 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || |||||| | | Sbjct 1016 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1075 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || || | | ||||| | || |||| || | ||||| || || || || | ||||| Sbjct 1076 GATAGTATTGAAAACG-TCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCA 1134 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||||| || || ||||| | || || | || ||||| |||||||| Sbjct 1135 ACAGCGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAA 1194 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||| | || || |||||||| || ||| Sbjct 1195 TATCCAAAAAGAATCCACTCTCCATTTGGTCCTTCGT 1231 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || |||||||| ||| | || |||||| | | Sbjct 1472 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1531 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || || | | ||||| | || |||| || | ||||| || || || || | ||||| Sbjct 1532 GATAGTATTGAAAACG-TCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCA 1590 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||||| || || ||||| | || || | || ||||| |||||||| Sbjct 1591 ACAGCGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAA 1650 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||| | || || |||||||| || ||| Sbjct 1651 TATCCAAAAAGAATCCACTCTCCATTTGGTCCTTCGT 1687 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || || || || ||||| | || |||||| | | Sbjct 1244 ATGCAAATTTTCGTCAAAACACTTACCGGAAAGACTATCACTTTGGAGGTCGAGTCTTCT 1303 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || ||| | | | | || |||| || | ||||| || || ||||| |||| ||| Sbjct 1304 GATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 1363 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | || || ||||| || || || | || || | | ||||||||| Sbjct 1364 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 1423 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||| ||| | || || || ||||| || ||| Sbjct 1424 ATTCAAAAAGAATCCACTCTTCACTTGGTTCTCCGT 1459 >seq3880 Length=130811 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| || || || || |||||||| ||||| | || || || | || Sbjct 118626 ATGCAAATATTCGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCC 118685 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | ||| ||||| | |||||||| || ||||| | || ||| Sbjct 118686 GATACCATTGATAATGTGAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 118745 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | || || | || |||||||| || || || | || || | | ||| || || Sbjct 118746 CAAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAAT 118805 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||||||| | || || |||||||| | ||||| ||||| || Sbjct 118806 ATACAAAAGGAATCAACACTCCATTTGGTATTACGTTTAAGAGGTGG 118852 >seq3789 Length=135228 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| || || ||||| || || ||||| || ||||| | || ||||| || Sbjct 104403 AAAATGCAAATCTTTGTTAAAACACTTACTGGCAAGACAATCACTTTGGAGGTCGAATCC 104462 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || || | | | | || ||||||||| ||||| || || ||||| | || Sbjct 104463 TCTGATAGTATTGAGAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCTCCTGAT 104522 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| || | || | || || || ||||| || || | || || | | |||||| Sbjct 104523 CAACAACGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACTTTGAGTGACTAC 104582 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||||||| | || || || ||||| || ||| Sbjct 104583 AACATTCAAAAGGAATCCACTCTCCACTTGGTTCTCCGT 104621 >seq3850 Length=152326 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 |||| || | ||||| || || ||||| | |||||||| || ||||||| ||| || | Sbjct 95393 AAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAACGTCTCATTTTCGCCGGTA 95334 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 |||| | || |||| || || | | |||||||||||| ||||||||| | || || | Sbjct 95333 AACAATTAGAAGACGGTCGTACTTTGAGCGACTACAACATTCAAAAGGAATCCACCCTTC 95274 Query 38446 ATTTGGTGCTGCGT 38459 | ||||| || ||| Sbjct 95273 ACTTGGTTCTCCGT 95260 >seq2895 Length=151278 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 |||| || | ||||| || || ||||| | || ||||| || ||||||| ||| || | Sbjct 146039 AAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGTA 145980 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 |||| |||| || | |||||| | | ||||||||||| ||||||||| | || || | Sbjct 145979 AACAATTGGAAGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAATCCACTCTTC 145920 Query 38446 ATTTGGTGCTGCGT 38459 | ||||| || ||| Sbjct 145919 ACTTGGTTCTCCGT 145906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500148285280640