Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3799 210 3e-49 seq2503 87.8 2e-12 >seq3799 Length=82858 Score = 210 bits (232), Expect = 3e-49 Identities = 591/902 (66%), Gaps = 14/902 (2%) Strand=Plus/Plus Query 111625 TCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACG 111684 ||||||| ||||| || |||||||| || ||||||||||| ||| | ||||| ||| Sbjct 42964 TCATGCGTGTCGCTATTGGTATCCACGGTGAAGATATTGACGCTGCAATTGAGACTTACA 43023 Query 111685 ACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACA 111743 || |||||| | | || || | || || | || || | ||||| || |||||| Sbjct 43024 ACTTGATGTCT-GAGAAATTCTTTACTCATGCCAGTCCCACTTTGTTCAATGCCGGTACA 43082 Query 111744 CCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGC 111803 || | || || |||||| ||| ||| | | | | ||||| |||||||| | ||| Sbjct 43083 CCTCGTCCTCAGATGTCCTCTTGCTTCTTGCTCACCATGAAGGAAGATTCAATTGAAGGC 43142 Query 111804 ATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATG 111863 || || | || | | ||||||||||| || || || ||||||||||| | Sbjct 43143 ATCTATGAAACATTAAAAATCTGTGCCCAAATTTCGAAAACTGCAGGTGGTATCGGTCTC 43202 Query 111864 CACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGAT 111923 |||| || || | | ||||| || |||| |||||||||||| | || || Sbjct 43203 AACATTCACAATATTCGTGCCAATGGATCCTATATTGCCGGTACAAATGGTTATTCGAAT 43262 Query 111924 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG- 111982 ||| | |||| ||||| || || || || |||||| || ||||| | |||| ||| Sbjct 43263 GGTTTGCTTCCCATGCTGCGTGTGTTCAATAACACAGCACGTTATGTCGATCAAGGTGGC 43322 Query 111983 -----GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATG 112037 ||||| |||| | |||| | ||||||||||||||||| ||||||||| | Sbjct 43323 AACAAGCGTC---CGGGAGCCTTCGCCATGTATCTTGAGCCATGGCATGCGGATATCTTT 43379 Query 112038 GAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTC 112097 || | || || | ||| ||| | || || | ||| ||| | || Sbjct 43380 ACCTTTTTAGATTTAAGAAAGAACTTTGGTAAGGATGAAATCAGAGCCCGTGATTTGTTT 43439 Query 112098 TCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCT 112157 | || || ||| | || |||||||||||| | | || |||| |||| |||||||| Sbjct 43440 TATGCCCTTTGGGTACCCGATCTCTTCATGCAACGTGTCAAGGACGGTGGGGATTGGTCT 43499 Query 112158 CTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCC 112217 ||||||||||| | | ||||| ||| | |||| |||||| ||||||| ||| Sbjct 43500 CTCTTTTGTCCTAATGAAGCACCTGGTTTGCAAGATGTTTGGGGTGATGAGTTTGTAGCT 43559 Query 112218 CTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTG 112277 || || || || || ||| | | |||| | ||| | || | | Sbjct 43560 CTTTATGAAAGCTATGAACGCGAAGGAAGAGCGAGAGAGACAATTAAGGCACAAAAGTTA 43619 Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | ||||| | | | ||||| || || |||| || | |||||| ||||| || Sbjct 43620 TGGTATGCTATCTTGGAAGCACAAACTGAAACCGGTAACCCGTTTATGCTCTACAAGGAT 43679 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 || ||||| |||||| || ||| | || |||||| || || || ||||| ||| Sbjct 43680 GCTTGTAATAGAAAGAGCAACCAACAAAACTTGGGTACCATTAAATGTAGTAACCTTTGT 43739 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457 || ||||| | |||| |||| | ||||| ||||| |||||| | || || ||| Sbjct 43740 ACGGAAATTGTCGAATATACAAGCCCCGATGAAGTTGCTGTTTGTAACTTGGCTTCTATC 43799 Query 112458 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAA 112517 ||| | |||| | ||| ||| | ||| || | | |||| | | |||||||||| Sbjct 43800 GCTTTACCCACTTTTGT-AATCAACAGAGAA--TCTTACGATTTCAAGAGACTCCACGAA 43856 Query 112518 GT 112519 || Sbjct 43857 GT 43858 Score = 96.9 bits (106), Expect = 4e-15 Identities = 264/399 (66%), Gaps = 4/399 (1%) Strand=Plus/Plus Query 112592 ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT 112651 ||| || | |||||| ||||| || ||| | |||||||||||| | || || |||||| Sbjct 43989 ATCAAACAAGAGACATCGTCCTATCGGTTTAGGTGTCCAAGGTTTAGCAGACACATTCAT 44048 Query 112652 TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGA 112711 | || || | ||||| || ||||| || || | ||| | || ||||| Sbjct 44049 GGCCTTACGTTACCCCTTTGACTCTCCTGAAGCCAAACAATTAAATATTCAAATCTTTGA 44108 Query 112712 GACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATA 112771 || || ||||| || || | || || | || ||||| || | || || || Sbjct 44109 AACTATCTATCATGCTGCATTGGAAGCCTCATGCGAATTGGCCGAAAAGTACGGACCTTA 44168 Query 112772 TGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT-CAATTTGATATGTGGGAAG 112830 |||||| | ||| ||| ||| | || |||||| ||| |||| || |||| |||| Sbjct 44169 TGAAACTTATGAAGGTAGTCCTGTATC-CAAGGGCATCTTACAATACGACATGT-GGAAT 44226 Query 112831 GTGAGACCAAGCT-TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889 |||| ||| | || || | ||||||| | || |||||| || || | || Sbjct 44227 GTGACACCCACCTCTCTTTGGGACTGGGCTTCACTAAAGGAAAAGATAGCCAAGCACGGC 44286 Query 112890 CTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 112949 |||| || |||||| | || || ||||| || ||||| ||| | ||||| |||||| Sbjct 44287 GTTCGCAATTCACTTTTGTTAGCCCCTATGCCTACCGCCTCTACCTCTCAAATGTTGGGT 44346 Query 112950 AATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988 ||||| || ||||| || ||||| | ||| | ||| Sbjct 44347 TTCAATGAGTGTTTTGAGCCTTACACTTCTAACTTTTAT 44385 >seq2503 Length=34491 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/223 (69%), Gaps = 5/223 (2%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 102168 |||||| |||||| | || || ||||||||| | || ||| | | || ||| | Sbjct 7342 AGTTCCCTGTATTAAGCGTAAGGCCGATTGGGCTTTCAAATGGATCTCATCCAACGAA-- 7285 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 ||||||||||| || || |||| ||||| ||| || || |||||||| || |||| Sbjct 7284 --TCCTTTGCTGAACGTCTGGTCGCCTTTGCCGCTGTCGAAGGCATCTTCTTTTCCGGTT 7227 Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 | ||| | | || | |||| | ||||| || ||| | ||||| ||| | ||| | Sbjct 7226 CATTCGCCTCCATCTTTTGGTTAAAGAAACGTGGTTTGATGCCCGGTTTGACGTTCAGTA 7167 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 | || | |||| ||||||||| || || ||| || ||||| Sbjct 7166 ATGAATTGATCTGTCGTGACGAAGGTCTTCACACCGATTTTGC 7124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620711975863120