Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3799 219 5e-52 >seq3799 Length=82858 Score = 219 bits (242), Expect = 5e-52 Identities = 560/843 (66%), Gaps = 17/843 (2%) Strand=Plus/Minus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 ||||| || ||||| || |||||||| ||||| ||| || || | |||||| Sbjct 43801 GCGATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGGCTTGTATATTCGACAATTTCC 43742 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 ||||| | ||| || ||||| || ||||| || | |||||| |||||| | || || Sbjct 43741 GTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGTTGGTTGCTCTTTCTATTACAA 43682 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 ||||||||||||||||| | || | || || || || |||| | | || || | | Sbjct 43681 GCATCCTTGTAGAGCATAAACGGGTTACCGGTTTCAGTTTGTGCTTCCAAGATAGCATAC 43622 Query 106643 CACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCG-TCCCTCCGCCT-CGTACTTTGTG 106699 || | | | | | || || | || | | | | | ||| ||| | | || || Sbjct 43621 CATAACTTTTGTGCCT--TA-ATTGTCTCTCTCGCTCTTCCTTCGCGTTCATAGCTTTCA 43565 Query 106700 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 106759 || || ||| ||||||| |||||| | || | ||| ||||| | | ||||| Sbjct 43564 TAAAGAGCTACAAACTCATCACCCCAAACATCTTGCAAACCAGGTGCTTCATTAGGACAA 43505 Query 106760 AAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819 || |||||||| | ||||| |||| || || | |||||| || || || | ||| ||| Sbjct 43504 AAGAGAGACCAATCCCCACCGTCCTTGACACGTTGCATGAAGAGATCGGGTACCCAAAGG 43445 Query 106820 GATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 106878 | |||| | ||| | | | || || || | ||| ||| || ||| || | Sbjct 43444 GCATAAAACAAATCACGGGCTCTGATT-TCATCCTTACCAAAGTTCTTTCTTAAATCTAA 43386 Query 106879 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG 106938 || | ||||||||| ||||||||||||||||| | |||| | |||| |||| Sbjct 43385 AAAGGTAAAGATATCCGCATGCCATGGCTCAAGATACATGGCGAAGGCTCCC---GGACG 43329 Query 106939 C------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992 | ||| |||||| ||||| || |||||| || || || || ||||| |||| Sbjct 43328 CTTGTTGCCACCTTGATCGACATAACGTGCTGTGTTATTGAACACACGCAGCATGGGAAG 43269 Query 106993 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 107052 | ||||| || | ||||||||| || |||| ||| |||||| | | || || Sbjct 43268 CAAACCATTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGGCACGAATATTGTG 43209 Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 107112 |||| | || ||||| || || || || ||||| ||||| | | ||| | Sbjct 43208 AATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGATTTTTAATGTTTC 43149 Query 107113 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172 |||||| || | ||||| || ||||| ||| || | ||||||| ||||||||| || Sbjct 43148 ATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAGGACATCTGAGG 43089 Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACAT 107232 | |||||||| |||||||| | || || | || ||| | || | | ||||| Sbjct 43088 ACGAGGTGTACCGGCATTGAACAAAGTGGGACTGGCATGAGTAAAGAATTTCTCAGACAT 43029 Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292 | || ||| ||||| | ||| ||||| ||||| |||||||| || || || ||||| Sbjct 43028 CAAGTTGTAAGTCTCAATTGCAGCGTCAATATCTTCACCGTGGATACCAATAGCGACACG 42969 Query 107293 CAT 107295 ||| Sbjct 42968 CAT 42966 Score = 100 bits (110), Expect = 3e-16 Identities = 271/406 (67%), Gaps = 9/406 (2%) Strand=Plus/Minus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| | ||| | ||||| || ||||| || ||||| |||||| ||||| | ||| || Sbjct 44385 ATAAAAGTTAGAAGTGTAAGGCTCAAAACACTCATTGAAACCCAACATTTGAGAGGTAGA 44326 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCT--TTTCCTTGATGCGT 106051 ||| || ||||| || || | |||||| || |||| || | || || || | Sbjct 44325 GGCGGTAGGCATAGGGGCTAACAAAAGTGAATTGCGAACGCCGTGCTTGGCT--ATCTTT 44268 Query 106052 TCCTTGAGAACATCCCAGTCGTAGTT-GAGCTTGGTTTCACCTTCCCACATATCAAATTG 106110 ||||| || | ||||||| | ||| | ||| |||| |||| |||| || |||| Sbjct 44267 TCCTTTAGTGAAGCCCAGTCCCAAAGAGAGGTGGGTGTCACATTCC-ACATGTCGTATTG 44209 Query 106111 -AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG 106169 ||| ||||||| | ||| ||| ||| | || ||||| | || | ||| | Sbjct 44208 TAAGATGCCCTTGG-ATACAGGACTACCTTCATAAGTTTCATAAGGTCCGTACTTTTCGG 44150 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 ||||||| || || |||| | || ||||| || ||||||||||| || ||| | Sbjct 44149 CCAATTCGCATGAGGCTTCCAATGCAGCATGATAGATAGTTTCAAAGATTTGAATATTTA 44090 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289 | ||||||||| || ||||| | ||| || | || ||| || || | || Sbjct 44089 ATTGTTTGGCTTCAGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCTGCTAAAC 44030 Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTC 106334 |||| ||||| ||||| ||||| | |||| | | || || ||||| Sbjct 44029 CTTGGACACCTAAACCGATAGGACGATGTCTCTTGTTTGATCTTTC 43984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589951883566040