Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3060 165 9e-36 >seq3060 Length=185695 Score = 165 bits (182), Expect = 9e-36 Identities = 452/687 (66%), Gaps = 14/687 (2%) Strand=Plus/Minus Query 154419 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAAT 154478 ||||| | || ||||| || ||| || | ||||| ||||| |||||||| || ||| Sbjct 46507 AAAGACCTTTCTTTAGTGCATTCCATGATTGCTCTTGGTAGTTGTACAATGAAGTTGAAT 46448 Query 154479 GCAGCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 154538 || | | ||| | || |||||| | ||| || || | || || ||||| | || Sbjct 46447 GCCACCACTGAAATGATTCCTGTGACCTGGCCTGAATTCTCCAATGTCCATCCCTTTGCA 46388 Query 154539 CCTATGATACAGACCATGGGTTATCAGAAAATTATAGATGA-CTTACAGAAATGGTTATG 154597 ||| | ||| ||| ||||| | | || | ||||| ||| | || | | | Sbjct 46387 CCTGTAGAACAAACCCAAGGTTACCTCACTATGCTTGATGAACTTGCCGATGACTTGAAG 46328 Query 154598 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 154657 || || || || ||||| | |||| | || || || | || | || ||||| || Sbjct 46327 -GAGATTACTGGATTTGAAGGTGTATCTCTTCAGCCCAATTCTGGTGCTCAAGGTGAATA 46269 Query 154658 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 154717 ||| || || | |||| || || || || | ||||||||| | | ||||| Sbjct 46268 TGCTGGTCTTCGTGTCATCCGTGCTTATCACCATGCTCGCGGAGATGATCGACGTAATGT 46209 Query 154718 ATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGAT 154777 ||| |||| || ||||| || || || |||||||| |||| |||| || || Sbjct 46208 ATGCCTGATTCCTATTTCAGCTCACGGCACAAATCCTGCATCAGCTGCCATGTGTGGAAT 46149 Query 154778 GAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAA 154837 | | |||| ||| | |||||| |||| || ||| | || || | ||| || || Sbjct 46148 GGATATTGTCATTGTACAATGTGATAATGAAGGCAACTTGGATATGGAGGATTTAAAGGC 46089 Query 154838 GAAAGC-----AAT-CATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATC 154891 |||||| ||| || | ||| ||| | || ||| ||||| || |||||| Sbjct 46088 GAAAGCTAAGAAATACAAGGATAGATTGGG--TGC----TATCATGATCACTTACCCAAG 46035 Query 154892 TACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGG 154951 |||| |||| | ||||| || | || ||||||| | || ||||| ||||| Sbjct 46034 TACATTTGGTATGTTTGAGCCTGGTGTATCTGAGGCATGTAAGGTTGTCCATGAAAATGG 45975 Query 154952 TGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATG 155011 ||||| || ||||||||||| || || | ||||| || | || | | || || Sbjct 45974 TGGTCTTGTTTATCTTGATGGCGCCAACTTGAATGCTCAAATCGGCTTGACTAAGCCTGC 45915 Query 155012 TGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGG 155071 ||| ||| || ||||| |||||| | ||||| || ||||| ||||||||||| ||||| Sbjct 45914 TGAAATTGGCGCTGATGTTTGTCATATGAACTTGCACAAAACCTTCTGTATTCCTCATGG 45855 Query 155072 AGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 |||||||| ||||| | || ||||| Sbjct 45854 CGGTGGAGGACCTGGTATGGGCCCTAT 45828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579184411332640