Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3060 178 2e-39 >seq3060 Length=185695 Score = 178 bits (196), Expect = 2e-39 Identities = 465/701 (66%), Gaps = 19/701 (3%) Strand=Plus/Minus Query 159094 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAAC 159153 ||||| | || ||||| || ||| || | |||||||||||||| ||||| | || Sbjct 46507 AAAGACCTTTCTTTAGTGCATTCCATGATTGCTCTTGGTAGTTGTACAATGAAGTTGAAT 46448 Query 159154 GCAGCATCAGAACTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 159213 || | | ||| |||| |||||| | ||| || || | || || ||||| | || Sbjct 46447 GCCACCACTGAAATGATTCCTGTGACCTGGCCTGAATTCTCCAATGTCCATCCCTTTGCA 46388 Query 159214 CCTATGATACAGACCATGGGTTATCAAAAAATTATAGATGA-CTTACAGAAATGGTTATG 159272 ||| | ||| ||| ||||| | | || | ||||| ||| | || | | | Sbjct 46387 CCTGTAGAACAAACCCAAGGTTACCTCACTATGCTTGATGAACTTGCCGATGACTTGAAG 46328 Query 159273 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 159332 || || || || ||||| | |||| | || || || | || | || ||||| || Sbjct 46327 -GAGATTACTGGATTTGAAGGTGTATCTCTTCAGCCCAATTCTGGTGCTCAAGGTGAATA 46269 Query 159333 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 159392 ||| || || | |||| || || || || | ||||||||| | | ||||| Sbjct 46268 TGCTGGTCTTCGTGTCATCCGTGCTTATCACCATGCTCGCGGAGATGATCGACGTAATGT 46209 Query 159393 ATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGAT 159452 ||| |||| || ||||| || || || |||||||||||||| | ||| || || Sbjct 46208 ATGCCTGATTCCTATTTCAGCTCACGGCACAAATCCTGCATCAGCTGCCATGTGTGGAAT 46149 Query 159453 GAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAA 159512 | | |||| ||| | |||||| |||| |||||| | || || | ||| || || Sbjct 46148 GGATATTGTCATTGTACAATGTGATAATGAAGGCAACTTGGATATGGAGGATTTAAAGGC 46089 Query 159513 GAAAGC-----AAT-CATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATC 159566 |||||| ||| || | ||| ||| | || ||| ||||| || || ||| Sbjct 46088 GAAAGCTAAGAAATACAAGGATAGATTGGG--TGC----TATCATGATCACTTACCCAAG 46035 Query 159567 TACACATGGTGTATTTGAAACAAAC--ATCAGACAGATATGTAAGATTGTTCATGAGAAT 159624 |||| |||| | ||||| | ||| || | ||||||| |||| ||||| ||| Sbjct 46034 TACATTTGGTATGTTTGAGCCTGGTGTATCTGA--GGCATGTAAGGTTGTCCATGAAAAT 45977 Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCA 159684 ||||||| || ||||||||||| || || | ||||| || | || | | || || Sbjct 45976 GGTGGTCTTGTTTATCTTGATGGCGCCAACTTGAATGCTCAAATCGGCTTGACTAAGCCT 45917 Query 159685 TGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACAT 159744 ||| ||| || ||||| |||||| | ||||| || || || ||||||||||| ||| Sbjct 45916 GCTGAAATTGGCGCTGATGTTTGTCATATGAACTTGCACAAAACCTTCTGTATTCCTCAT 45857 Query 159745 GGAGGTGGAGGTCCTGGCGTAGGTCCTATTG-GTGTAGCAA 159784 || |||||||| ||||| | || ||||||| |||| ||| Sbjct 45856 GGCGGTGGAGGACCTGGTATGGGCCCTATTGCCTGTACCAA 45816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588022378140560