Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2543 102 6e-17 seq175 102 6e-17 seq3880 86.0 5e-12 >seq2543 Length=10996 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| |||||||| |||||||| || || || | || | || || Sbjct 1452 ACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCTTCT 1393 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || || ||||| ||||| || || |||||||| || | || | ||| |||||||| | Sbjct 1392 AATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGA 1333 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || || | | | || || | ||| || |||| ||||| ||||| Sbjct 1332 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1273 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || ||||||||||| Sbjct 1272 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1244 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||||||||||| ||||| ||| | | | || | || || Sbjct 1224 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1165 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | || ||||| ||||| |||| || |||||||| | |||| || |||||||| | Sbjct 1164 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1105 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || || | | | || || | ||| || |||| ||||| ||||| Sbjct 1104 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1045 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || ||||||||||| Sbjct 1044 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||||||||||| ||||| ||| | | | || | || || Sbjct 1680 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1621 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | || ||||| ||||| |||| || |||||||| | |||| || |||||||| | Sbjct 1620 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1561 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || ||| | | || || | ||| ||||||| || || || ||| Sbjct 1560 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAAGTGATAGTCTTT 1501 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||||| || ||||| ||||| Sbjct 1500 CCGGTAAGTGTTTTGACGAAAATTTGCAT 1472 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||||||||||| ||||| ||| | | | || | || || Sbjct 1908 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1849 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | || ||||| ||||| |||| || |||||||| | |||| || |||||||| | Sbjct 1848 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1789 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || || | | | || || | ||| || |||| ||||| ||||| Sbjct 1788 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1729 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || ||||||||||| Sbjct 1728 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1700 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||||| || || ||| ||||||||||| ||||| ||| Sbjct 2154 CCGCCACGAAGACGAAGGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 2095 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | | || | || || | || ||||| ||||| |||| || |||||||| | ||| Sbjct 2094 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 2035 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||||||| || || | | | || || | ||| || Sbjct 2034 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1975 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| ||||| || || | || || || ||||||||||| Sbjct 1974 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1928 >seq175 Length=1843 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| |||||||| |||||||| || || || | || | || || Sbjct 1224 ACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCTTCT 1165 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || || ||||| ||||| || || |||||||| || | || | ||| |||||||| | Sbjct 1164 AATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGA 1105 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || || | | | || || | ||| || |||| ||||| ||||| Sbjct 1104 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1045 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || ||||||||||| Sbjct 1044 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| |||||||| |||||||| || || || | || | || || Sbjct 1680 ACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCTTCT 1621 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || || ||||| ||||| || || |||||||| || | || | ||| |||||||| | Sbjct 1620 AATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGA 1561 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || || | | | || || | ||| || |||| ||||| ||||| Sbjct 1560 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1501 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || ||||||||||| Sbjct 1500 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1472 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||||||||||| ||||| ||| | | | || | || || Sbjct 1452 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1393 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | || ||||| ||||| |||| || |||||||| | |||| || |||||||| | Sbjct 1392 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1333 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || ||| | | || || | ||| ||||||| || || || ||| Sbjct 1332 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAAGTGATAGTCTTT 1273 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||||| || ||||| ||||| Sbjct 1272 CCGGTAAGTGTTTTGACGAAAATTTGCAT 1244 >seq3880 Length=130811 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||| ||||| || || || ||||||||||| || ||| ||| | ||| | || || Sbjct 118607 CACTAAATGAAGAGTTGATTCCTTTTGAATATTATAGTCACTGAGAGTACGACCATCCTC 118548 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 || || || || ||||| || || || |||||||| | |||| ||| ||||| || Sbjct 118547 TAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTATCTTG 118488 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||||||||| ||||| | | | | || || | || || || | || || ||||| Sbjct 118487 AATCTTTTGCTTTACGTTATCGATACTATCAGAAGATTCAACTTCTAAAGTGATAGTTTT 118428 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || |||||||| ||||| Sbjct 118427 ACCAGTAAGGGTCTTGACAAAAATTTGCAT 118398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380919396063483