Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3060 170 2e-37 >seq3060 Length=185695 Score = 170 bits (188), Expect = 2e-37 Identities = 503/766 (66%), Gaps = 27/766 (4%) Strand=Plus/Plus Query 138178 TTGCTACAC-CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTC 138236 ||| |||| ||||||| || | ||||| |||||||| ||||| ||||||||||| || Sbjct 45816 TTGGTACAGGCAATAGGGCCCATACCAGGTCCTCCACCGCCATGAGGAATACAGAAGGTT 45875 Query 138237 TTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACC 138296 || || || || | |||||| ||||| || ||| ||| || || | | || | Sbjct 45876 TTGTGCAAGTTCATATGACAAACATCAGCGCCAATTTCAGCAGGCTTAGTCAAGCCGATT 45935 Query 138297 TGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTA 138356 || ||||| | || || ||||| ||||| || |||||||||| ||||| || | |||| Sbjct 45936 TGAGCATTCAAGTTGGCGCCATCAAGATAAACAAGACCACCATTTTCATGGACAACCTTA 45995 Query 138357 CATATCTGTCTGATGTTT--GTTTCAAATACACCATGAGTCGATGGATATGTAATCATAA 138414 ||| || | ||| | ||||| | |||| || ||| || || ||||| | Sbjct 45996 CATGCCT--CAGATACACCAGGCTCAAACATACCAAATGTACTTGGGTAAGTGATCATGA 46053 Query 138415 TA-CATGAGAGTTCAAATGTATTCATG-ATT-----GCTTTCTTCTCTAGATCTTTGATG 138467 || || | ||| ||| | || ||| |||||| || || ||| | || Sbjct 46054 TAGCAC-------CCAATCTATCCTTGTATTTCTTAGCTTTCGCCTTTAAATCCTCCATA 46106 Query 138468 TCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCA 138527 || | |||||| |||| |||||| | ||| |||| | |||||| |||| | || Sbjct 46107 TCCAAGTTGCCTTCATTATCACATTGTACAATGACAATATCCATTCCACACATGGCAGCT 46166 Query 138528 CTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCT 138587 |||||||| || || || ||||| || ||||| |||||||| | | ||||||| Sbjct 46167 GATGCAGGATTTGTGCCGTGAGCTGAAATAGGAATCAGGCATACATTACGTCGATCATCT 46226 Query 138588 CCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCT 138647 || | || ||||| || |||| | || || ||||| ||||| || | || Sbjct 46227 CCGCGAGCATGGTGATAAGCACGGATGACACGAAGACCAGCATATTCACCTTGAGCACCA 46286 Query 138648 GCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAAG 138707 | || || || | |||| | ||||| || || || || | | | || | ||| Sbjct 46287 GAATTGGGCTGAAGAGATACACCTTCAAATCCAGTAATCTC-CTTCAAGTCATCGGCAAG 46345 Query 138708 T-CATCTATTATCTTTTGATAACCCATGGTCTGTATCATAGGTGTATGTGGATGCACGTT 138766 | |||| | || | | ||||| ||| ||| | ||||| | ||||| || || Sbjct 46346 TTCATCAAGCATAGTGAGGTAACCTTGGGTTTGTTCTACAGGTGCAAAGGGATGGACATT 46405 Query 138767 GGCAAATTCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCA 138826 || ||||| ||| | |||||| |||| ||| | | ||||| | |||||||| || Sbjct 46406 GGAGAATTCAGGCCAGGTCACAGGAATCATTTCAGTGGTGGCATTCAACTTCATTGTACA 46465 Query 138827 ACTACCAAGTGGAACCATACCATTTACTAATGAGAAATCTTTAGAGCAT---AACTCATA 138883 ||||||||| | || ||| || ||||| || | ||||| || | | | || Sbjct 46466 ACTACCAAGAGCAATCATGGAATGCACTAAAGAAAGGTCTTT---GCTTTCAAGATGATG 46522 Query 138884 GATATATCTCATCATGTCAGTTTCACTGTGATACTTATTGAATACT 138929 || || | | ||| |||||||| |||||| |||||||||| Sbjct 46523 AATGTAACGAAGCATTTCAGTTTCTGAGTGATAGGAATTGAATACT 46568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578970021840920