Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3792 271 1e-67 seq3638 253 3e-62 seq2503 228 1e-54 >seq3792 Length=31585 Score = 271 bits (300), Expect = 1e-67 Identities = 534/777 (69%), Gaps = 17/777 (2%) Strand=Plus/Minus Query 47554 ACCAATTGTTTAAAAGAAGTTTTAGGTTCCCAACCCAATTTTTTCTTTGCCTTAGAGGCA 47613 |||| || | ||||| | ||| ||| ||| ||||||| | || ||||| | | | Sbjct 15839 ACCAGTTCATCAAAAGTAACCTTACGTTTCCAGCCCAATTCAGTGTTGGCCTTTGTAGGA 15780 Query 47614 TCACCTAATAAGGTCTCTACTTCAGCAGGACGGAAATATTTAGAGTCAATTCTGATAACC 47673 ||||| || || || ||||| |||||||| || ||||| | || || | | | | Sbjct 15779 TCACCCAACAAAAGATCAACTTCGGCAGGACGAAAGTATTTGGGATCGATGCGCACACGC 15720 Query 47674 GTTTTACCA---TCAGAATCAATACCAACTTCATCAAGACCAGAACCTTCCCATCTAATA 47730 ||||| |||| || |||||| |||| | ||| ||||||||| |||| Sbjct 15719 ACCTTACCTGTCTCAGCGTCTTTACCAATCTCATTCACACCTTCACCTTCCCAAACAATA 15660 Query 47731 TTCATATCAAAATAAGGTGCAGATTCCT---CAACAAACTGACGGACAGAATATTGATTT 47787 | | || | ||| | | || ||| ||||||| | |||| || | | Sbjct 15659 GT-ACGTCCAG-TAACCTTGA-ATGCCTTTTCAACAAAACTTCTTACAGTATGTGTTTCA 15603 Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 |||||||| | || ||||| | ||| | |||||| |||||||| | ||||||| |||| Sbjct 15602 CCTGTGGCCAGGACGAAATCTTGAGGCTTTTCTTGCTGAAGCATGAGCCACATACCCTCT 15543 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 ||||| || | ||||||||||| ||||| ||||||| || || ||||| | ||| Sbjct 15542 ACATAGTCACGAGCATGTCCCCAATCACGTTTGGCATCAATGTTACCCAGATAAAGACAA 15483 Query 47908 TCTTGCTTACCTTCAGAGATTG-CTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGT 47966 || || ||| || || | | | || | ||| || ||||| |||||||| || Sbjct 15482 TCCTGACGGCCTA-AGTGAATATCGGCCACAGCACGTGTGATTTTACGGGTTACAAAGGT 15424 Query 47967 TTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTA 48026 |||||| | || ||||| || || ||||| |||||| | || |||||||| |||| Sbjct 15423 ACGACCACGACGAGGTGATTCGTGGTTGAAAAGGATACCATTGCAAGCATACATGTCGTA 15364 Query 48027 TGATTCACGATAGTTCTTTACT-ATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAG 48085 |||||||| ||||| | | | |||||||| |||||||| || ||||||||||| |||| Sbjct 15363 GGATTCACGGTAGTT-TACAGTGATCCAGTAGCCATAGAGCTTGGCAACACCATAGGGAG 15305 Query 48086 AACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTT 48145 | || |||||||| || ||||| || | || |||||||| |||||||| ||||||| Sbjct 15304 ACCGAGGATAGAAGGGCGTGGTTTCCTTTTGAGGAGTCTCGACGACCTTACCGTAAAGTT 15245 Query 48146 CACTGGTGGATGCTTGATAGATACGAACCCTATC--TTCCATCTCAAGCAAACGGACTGC 48203 || ||| || ||||| |||| ||| || | || | | | |||| ||||| || Sbjct 15244 CAGAGGTAGAGGCTTGGTAGAAACGGACTCGGTCAGCTAAACCACAAG--TACGGATAGC 15187 Query 48204 CTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAA 48263 || | | | || ||||| | ||||| | ||||||||| || | ||| ||||| Sbjct 15186 ATCTAATAAACGAAGTGTGCCAAGAGCATCGACGTCACCAGTATATTCAGACATGTCAAA 15127 Query 48264 CGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCATCTGGTTGAACCTG 48320 ||||| || |||||| || || |||||||||||| ||| ||||| | ||| Sbjct 15126 AGAAACTTTGACATGAGATTGAGCAGCAAGATTATAAACTTCAGTAGGTTGGATCTG 15070 >seq3638 Length=92813 Score = 253 bits (280), Expect = 3e-62 Identities = 490/716 (68%), Gaps = 19/716 (3%) Strand=Plus/Plus Query 47575 TTAGGTTCCCAACCCAATTTTTTCTTTGCCTTAGAGGCATCACCTAATAAGGTCTCTACT 47634 ||| ||| ||| ||||||| | || ||||| | | |||||| || ||| || ||| Sbjct 87807 TTACGTTTCCAGCCCAATTCGGTATTAGCCTTTGTAGGATCACCCAACAAGAGATCAACT 87866 Query 47635 TCAGCAGGACGGAAATATTTAGAGTCAATTCTGATA---ACCGTTTTACCA---TCAGAA 47688 ||||||||||| || || || | ||| || | | | ||| |||||| || | | Sbjct 87867 TCAGCAGGACGAAAGTACTTGGGGTCGATACGCACACGAACC---TTACCAGTCTCGGCA 87923 Query 47689 TCAATACCAACTTCATCAAGACCAGAACCTTCCCATCTAATATTCATA--TCAAAATAAG 47746 || |||||| |||| | ||| ||||||||| || || || || | | Sbjct 87924 TCTTTACCAATCTCATTCACACCTTCACCTTCCCA---AACGATCGTACGTCCAGTGACC 87980 Query 47747 GTGCAGA-TTCCTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAA 47805 || || || |||||||| | |||| || | | ||||| || | ||||| Sbjct 87981 TTGAAGGCTTTTTCAACAAAACTTCTTACAGTATGTGTTTCACCTGTAGCCAAGACAAAG 88040 Query 47806 TCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGT 47865 || | ||| | |||||| || ||||| | |||||| | || |||||||| | ||||||| Sbjct 88041 TCTTGAGGCTTTTCTTGCTGGAGCATGAGCCACATGCCTTCAACATAATCACGGGCATGT 88100 Query 47866 CCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAG 47925 ||||| ||||| ||||||| ||| || | || | ||||||||| |||| | | Sbjct 88101 CCCCAATCACGCTTGGCATCAATATTACCCAAGTAAAGACAGTCTTGACGACCTAAATGG 88160 Query 47926 ATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGAT 47985 || | || || | || ||||| ||||| ||||| || |||||| | || ||| Sbjct 88161 ATATCAGCTACAGCACGCGTGATCTTGCGAGTAACAAAGGTACGACCACGACGAGGTGAT 88220 Query 47986 TCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTT 48045 || || || || || ||||| |||||| |||||| |||| |||||||| || || Sbjct 88221 TCGTGGTTGAAGAGGATACCGTTACAGGTATACATCTCGTACGATTCACGGTAATTGACC 88280 Query 48046 ACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTG 48105 || |||||||| |||||||| || || ||||| ||||||||||| |||||||| |||||| Sbjct 88281 ACAATCCAGTAACCATAGAGCTTGGCGACACCGTAAGGAGAACGAGGATAGAAGGGTGTG 88340 Query 48106 GTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAG 48165 || || | || || || || || ||||| ||||||||| ||| || ||||| ||| Sbjct 88341 GTTTCCTTTTGAGGTGTTTCGACAACTTTACCGTAAAGTTCAGAGGTAGAGGCTTGGTAG 88400 Query 48166 ATACGAACCCTATC--TTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGC 48223 | ||||| | ||| || | | || | ||| | || || | | | || |||| Sbjct 88401 AAGCGAACTCGATCAGTTAAACCACA--CGTACGAATGGCGTCCAAGAGACGAAGTGTGC 88458 Query 48224 CTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGA 48279 | | ||||| | ||||||||| |||| ||| ||||| || || || |||||| Sbjct 88459 CGAGAGCATCAACATCACCAGTATATTCGGACATGTCAAAGGACACTTTGACATGA 88514 >seq2503 Length=34491 Score = 228 bits (252), Expect = 1e-54 Identities = 488/719 (68%), Gaps = 25/719 (3%) Strand=Plus/Minus Query 47575 TTAGGTTCCCAACCCAATTTTTTCTTTGCCTTAGAGGCATCACCTAATAAGGTCTCTACT 47634 ||| ||| |||| ||||| | | || ||||| | | |||||| || ||| || ||| Sbjct 3524 TTACGTTTCCAATTCAATTCTGTATTGGCCTTGGTAGGATCACCCAACAAGAGATCGACT 3465 Query 47635 TCAGCAGGACGGAAATATTTAGAGTCAATTCTGATAACCGTTTTACCA---TCAGAATCA 47691 |||||||||||||||||||||| || || | | | | || || |||| ||| Sbjct 3464 TCAGCAGGACGGAAATATTTAGGATCGATACGAACACGAATCTTGCCCGATTCAGCATCT 3405 Query 47692 ATACCAACTTCATCAAGACCAGAACCTTCCCATCTAATATT----CATATCAAAATAAGG 47747 |||| || |||| | || |||||||| || | | | | | | | Sbjct 3404 CTACCGACCTCATTGACGCCTTCGCCTTCCCAGACGATCGTACGACCTGTGACTTTGAA- 3346 Query 47748 TGCAGATTCCTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATC 47807 ||| ||| ||| |||| | ||| | || | | ||| || || | |||||||| Sbjct 3345 TGCCTTTTCGACAA--AACTT-CTGACGGTATGTGTCTCTCCGGTAGCCAAGACAAAATC 3289 Query 47808 ATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCC 47867 | ||| | |||||| |||||||| | |||||| |||| ||||| || | |||||||| Sbjct 3288 TTGAGGCTTTTCTTGCTGAAGCATGAGCCACATGCCCTCTACATAGTCACGCGCATGTCC 3229 Query 47868 CCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGAT 47927 ||| ||||| || |||| || || ||||| | ||| ||||| ||| || || Sbjct 3228 CCAATCACGCTTGGCGTCAATGTTACCCAGATAAAGACATTCTTGACGACCCA-AGTGAA 3170 Query 47928 TG-CTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATT 47986 | | || || | || ||||| ||||| ||||| || |||||| | || |||| Sbjct 3169 TATCAGCTACAGCACGAGTGATCTTTCGAGTGACAAAGGTACGACCACGACGGGGTGATT 3110 Query 47987 CATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTT--CTT 48044 |||| ||||| || ||||| ||||||||||||| |||| ||||| || ||||| | Sbjct 3109 CATGGTTAAACAGGATACCGTTACAGGCATACATGTCGTAAGATTCTCGGTAGTTGACCG 3050 Query 48045 TACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGT 48104 || |||||||| |||||||| || || ||||||||||||||||| || ||||| ||||| Sbjct 3049 TA--ATCCAGTAACCATAGAGCTTGGCCACACCATAAGGAGAACGAGGGTAGAAGGGTGT 2992 Query 48105 GGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATA 48164 ||||| | || || ||||| |||||||| ||||| ||| ||| || ||||| || Sbjct 2991 AGTCTCCTTTTGAGGTGTCTCCACGACCTTACCGTAAAGCTCAGAGGTCGAGGCTTGGTA 2932 Query 48165 GATACGAACCCTATCTTCCATCTCAAGCA----AACGGACTGCCTCAAGCACTCTCAGGG 48220 | || || || || || || || ||||| || || | | | || | Sbjct 2931 AAATCGGAC----TCGGTCAGCTAAACCACAGGTACGGATGGCATCCAATAAACGAAGTG 2876 Query 48221 TGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGA 48279 | || | ||||| | ||| || || || | ||| |||||||||||||| |||||| Sbjct 2875 TACCAAGAGCATCGACATCACCTGTGTATTCAGACATGTCAAACGAAACCTTGACATGA 2817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665461782455720