Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3799 233 2e-56 seq2503 125 9e-24 seq3638 118 1e-21 seq3792 100 3e-16 seq3903 87.8 2e-12 seq1498 82.4 9e-11 >seq3799 Length=82858 Score = 233 bits (258), Expect = 2e-56 Identities = 561/843 (67%), Gaps = 13/843 (2%) Strand=Plus/Plus Query 75225 TCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACG 75284 ||||||| ||||| || || |||||||| ||||| ||||| ||| | ||||| ||| Sbjct 42964 TCATGCGTGTCGCTATTGGTATCCACGGTGAAGATATTGACGCTGCAATTGAGACTTACA 43023 Query 75285 ACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACAC 75344 || |||||| | | || | ||| || | || || | |||||||| ||||||| Sbjct 43024 ACTTGATGTCTGAGAAATTCTTTACTCATGCCAGTCCCACTTTGTTCAATGCCGGTACAC 43083 Query 75345 CAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTA 75404 | | || ||||||||| ||||||| | || ||| ||||| || ||||| | || | Sbjct 43084 CTCGTCCTCAGATGTCCTCTTGCTTCTTGCTCACCATGAAGGAAGATTCAATTGAAGGCA 43143 Query 75405 TCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGC 75464 |||||| ||| | | ||||| ||||| || || || || ||||| || | Sbjct 43144 TCTATGAAACATTAAAAATCTGTGCCCAAATTTCGAAAACTGCAGGTGGTATCGGTCTCA 43203 Query 75465 ACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATG 75524 |||| || || | | |||||| ||| |||| || ||||||||| | || ||| Sbjct 43204 ACATTCACAATATTCGTGCCAATGGATCCTATATTGCCGGTACAAATGGTTATTCGAATG 43263 Query 75525 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGG-- 75582 || | |||| ||||| || || || || |||||| || ||||| |||||| || Sbjct 43264 GTTTGCTTCCCATGCTGCGTGTGTTCAATAACACAGCACGTTATGTCGATCAAGGTGGCA 43323 Query 75583 ----GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGG 75638 ||||| ||| || |||| | || | || ||||||||||| |||||| | Sbjct 43324 ACAAGCGTCC---GGGAGCCTTCGCCATGTATCTTGAGCCATGGCATGCGGATATCTTTA 43380 Query 75639 AGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTT 75697 || | || ||| || ||| ||| | || || || | | | ||| | ||| Sbjct 43381 CCTTTTTAGATTTAAGAAAGAACTTTGGTAAGGATGA-AATCAGAGCCCGTGATTTGTTT 43439 Query 75698 TCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCT 75757 | |||| ||| | || || || |||||| | || || |||| ||||| | |||||| Sbjct 43440 TATGCCCTTTGGGTACCCGATCTCTTCATGCAACGTGTCAAGGACGGTGGGGATTGGTCT 43499 Query 75758 CTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCC 75817 || || ||||| | | ||||| ||| | || | |||||| ||||||| ||| Sbjct 43500 CTCTTTTGTCCTAATGAAGCACCTGGTTTGCAAGATGTTTGGGGTGATGAGTTTGTAGCT 43559 Query 75818 CTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT 75877 || || || |||||| || || ||||| | | ||| | || | | | ||| Sbjct 43560 CTTTATGAAAGCTATGAACGCGAAGGAAGAGCGAGAGAGACAAT-TAAGGCACAAAAGTT 43618 Query 75878 -TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGA 75936 ||| | ||||| | || |||| || || || || | || | |||||| |||||||| Sbjct 43619 ATGGTATGCTATCTTGGAAGCACAAACTGAAACCGGTAACCCGTTTATGCTCTACAAGGA 43678 Query 75937 TGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTG 75996 ||||||||| | ||||| |||||| | || ||||| || || || | || ||||| Sbjct 43679 TGCTTGTAATAGAAAGAGCAACCAACAAAACTTGGGTACCATTAAATGTAGTAACCTTTG 43738 Query 75997 CACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAAT 76056 ||||||||| | || || ||| ||||| |||||||| || ||||| || || Sbjct 43739 TACGGAAATTGTCGAATATACAAGCCCCGATGAAGTTGCTGTTTGTAACTTGGCTTCTAT 43798 Query 76057 CGC 76059 ||| Sbjct 43799 CGC 43801 Score = 102 bits (112), Expect = 1e-16 Identities = 261/391 (67%), Gaps = 5/391 (1%) Strand=Plus/Plus Query 76188 GAAAG-TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTA 76246 ||||| || || | | |||| | ||||| ||||| ||||| |||||| | || || | Sbjct 43984 GAAAGATCAAACAAGAGACATCGTCCTATCGGTTTAGGTGTCCAAGGTTTAGCAGACACA 44043 Query 76247 TTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATC 76306 || || | || ||| | ||||| || ||||||||| | | ||| || ||| Sbjct 44044 TTCATGGCCTTACGTTACCCCTTTGACTCTCCTGAAGCCAAACAATTAAATATTCAAATC 44103 Query 76307 TTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGT 76366 |||||||| || ||||| || | |||| || || |||||||| ||| | || Sbjct 44104 TTTGAAACTATCTATCATGCTGCATTGGAAGCCTCATGCGAATTGGCCGAAAAGTACGGA 44163 Query 76367 TCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTT-CAGTTTGATATGTG 76425 | ||||| || | ||| ||| ||| | | ||||||| ||| || | || |||| Sbjct 44164 CCTTATGAAACTTATGAAGGTAGTCCTGTAT-CCAAGGGCATCTTACAATACGACATGT- 44221 Query 76426 GGAAGGTGAAACCAAGCTC-AACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGA 76484 |||| |||| ||| | ||| | ||||||| | || |||||| || || Sbjct 44222 GGAATGTGACACCCACCTCTCTTTGGGACTGGGCTTCACTAAAGGAAAAGATAGCCAAGC 44281 Query 76485 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 76544 | || |||| || |||||| | || || ||||| || ||||| ||| | ||||| | Sbjct 44282 ACGGCGTTCGCAATTCACTTTTGTTAGCCCCTATGCCTACCGCCTCTACCTCTCAAATGT 44341 Query 76545 TGGGTAATAATGAATGCTTTGAACCATACAC 76575 ||||| ||||| || ||||| || ||||| Sbjct 44342 TGGGTTTCAATGAGTGTTTTGAGCCTTACAC 44372 >seq2503 Length=34491 Score = 125 bits (138), Expect = 9e-24 Identities = 283/424 (67%), Gaps = 6/424 (1%) Strand=Plus/Minus Query 177545 CTTTGAAGCACATTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACAT 177604 ||||||| | |||| ||||| || || | |||||||| || || || | ||| Sbjct 3352 CTTTGAATGCCTTTTCGACAAAACTTCTGACGGTATGTGTCTCTCCGGTAGCCAAGACAA 3293 Query 177605 ATTCATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCAT 177664 | || | || || |||||| |||||||||||||||||| | || |||||||| |||| Sbjct 3292 AATCTTGAGGCTTTTCTTGCTGAAGCATGAGCCACATGCCCTCTACATAGTCACGCGCAT 3233 Query 177665 GACCCCAGTCTCTGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCA 177724 | ||||| || | |||| | |||||| || | ||| | ||| ||| Sbjct 3232 GTCCCCAATCACGCTTGGCGTCAATGTTACCCAGATAAAGACATTCTTGACGACCCAAGT 3173 Query 177725 CAATTTGTTTGACGCCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTG 177784 ||| | || || ||| ||||| ||||||||| ||| || | |||| Sbjct 3172 GAATATCAGCTACAGCACGAGTGATCTTTCGAGTGACAAAGGTACGACCACGACGGGGTG 3113 Query 177785 ATTCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTT 177844 |||| ||||| || ||||| ||| ||||||||||| | || ||||||||||| | Sbjct 3112 ATTCATGGTTAAACAGGATACCGTTACAGGCATACATGTCGTAAGATTCTCGGTA---GT 3056 Query 177845 TGAC---GAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGG 177901 |||| | ||||| | | | |||| || ||||| || || |||||||||| Sbjct 3055 TGACCGTAATCCAGTAACCATAGAGCTTGGCCACACCATAAGGAGAACGAGGGTAGAAGG 2996 Query 177902 GTGTCTCCTCAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTT 177961 |||| ||| |||| || || || ||| ||||| | | ||| || || ||||||| Sbjct 2995 GTGTAGTCTCCTTTTGAGGTGTCTCCACGACCTTACCGTAAAGCTCAGAGGTCGAGGCTT 2936 Query 177962 GGTA 177965 |||| Sbjct 2935 GGTA 2932 >seq3638 Length=92813 Score = 118 bits (130), Expect = 1e-21 Identities = 278/416 (67%), Gaps = 14/416 (3%) Strand=Plus/Plus Query 177557 TTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCT 177616 |||||||||| || |||| ||||| || || || || | ||| | || | || || Sbjct 87991 TTTCAACAAAACTTCTTACAGTATGTGTTTCACCTGTAGCCAAGACAAAGTCTTGAGGCT 88050 Query 177617 CTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTC 177676 |||||| || ||||||||||||||| |||||||||| || |||||| ||||| || | Sbjct 88051 TTTCTTGCTGGAGCATGAGCCACATGCCTTCAACATAATCACGGGCATGTCCCCAATCAC 88110 Query 177677 ---TGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTT 177733 ||||| | | ||||| | | ||| | ||| |||| ||| | Sbjct 88111 GCTTGGCATCAATA---TTACCCAAGTAAAGACAGTCTTGACGACCTA----AATGGATA 88163 Query 177734 TGA-CGCCATCA---GTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCG 177789 | | | || || || ||||| || |||||| ||| || | ||||||||| Sbjct 88164 TCAGCTACAGCACGCGTGATCTTGCGAGTAACAAAGGTACGACCACGACGAGGTGATTCG 88223 Query 177790 TGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACG 177849 |||||||||||||| ||| |||| |||||| | || ||||| |||||||| || Sbjct 88224 TGGTTGAAGAGGATACCGTTACAGGTATACATCTCGTACGATTCACGGTAATTGACCACA 88283 Query 177850 AGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCC 177909 | ||||| | | | |||| ||| || || || || || ||||||||||| Sbjct 88284 ATCCAGTAACCATAGAGCTTGGCGACACCGTAAGGAGAACGAGGATAGAAGGGTGTGGTT 88343 Query 177910 TCAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || |||| || ||||| |||||||| | | || || || ||||||||||| Sbjct 88344 TCCTTTTGAGGTGTTTCGACAACTTTACCGTAAAGTTCAGAGGTAGAGGCTTGGTA 88399 >seq3792 Length=31585 Score = 100 bits (110), Expect = 3e-16 Identities = 276/419 (66%), Gaps = 8/419 (2%) Strand=Plus/Minus Query 177557 TTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCT 177616 |||||||||| || |||| ||||| || || || || | || | || | || || Sbjct 15634 TTTCAACAAAACTTCTTACAGTATGTGTTTCACCTGTGGCCAGGACGAAATCTTGAGGCT 15575 Query 177617 CTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTC 177676 |||||| ||||||||||||||||| | || |||||||| ||||| ||||| || | Sbjct 15574 TTTCTTGCTGAAGCATGAGCCACATACCCTCTACATAGTCACGAGCATGTCCCCAATCAC 15515 Query 177677 ---TGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCA-CCTTTCACAATTTGT 177732 ||||| | || ||||| || | ||| | || || | ||| ||| | Sbjct 15514 GTTTGGCATCAATG---TTACCCAGATAAAGACAATC-CTGACGGCCTAAGTGAATATCG 15459 Query 177733 TTGACGCCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGG 177792 || || || || || || |||||| ||| || | |||||||||||| Sbjct 15458 GCCACAGCACGTGTGATTTTACGGGTTACAAAGGTACGACCACGACGAGGTGATTCGTGG 15399 Query 177793 TTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGC 177852 ||||| ||||| || ||| |||||||| | |||||||| ||||| ||| || | Sbjct 15398 TTGAAAAGGATACCATTGCAAGCATACATGTCGTAGGATTCACGGTAGTTTACAGTGATC 15339 Query 177853 CAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCA 177912 |||| | | |||| || |||||| || || || |||||||| || || Sbjct 15338 CAGTAGCCATAGAGCTTGGCAACACCATAGGGAGACCGAGGATAGAAGGGCGTGGTTTCC 15279 Query 177913 GTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTATACACG 177971 |||| ||||| || ||| ||||| | | || || || ||||||||||| | ||| Sbjct 15278 TTTTGAGGAGTCTCGACGACCTTACCGTAAAGTTCAGAGGTAGAGGCTTGGTAGAAACG 15220 >seq3903 Length=141833 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||||| ||| ||||||| ||||| |||||||| || || | ||| | || || | Sbjct 10234 CCTCAGTATATGATCATGCGCGTCGCTATCGGCATTCATGGTGGTGACTTGGAAGGTGCC 10293 Query 75272 TTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 || |||| || || |||||| |||| || || | ||| || ||||| ||| | | Sbjct 10294 TTCAAGACCTATGATTTGATGTCTTCCAAA-TACTTT-ACTCATGCTACACCTACCTTGT 10351 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTC 75370 | |||||||||||||| ||||| ||| | || ||||| ||| Sbjct 10352 TTAATGCTGGTACACCCAGACCTCAGCTCTCTAGTTGTTTC 10392 >seq1498 Length=30484 Score = 82.4 bits (90), Expect = 9e-11 Identities = 91/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 13773 TCAAGAAGATCCTTGGTCTTCAACAAGGAAAAGACTAC-CAAGATGTTTCTGAACTTCGC 13831 ||||| || |||||||| || || || ||| | ||| |||| |||| || ||| | Sbjct 13313 TCAAGGCCATTCTTGGTCTCCAGCATGGTAAAAAATACACAAG-TGTTGACGAGCTTAGA 13255 Query 13832 TATGGTCGTCTTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCT 13890 ||||| || | ||||| ||||| ||| ||| ||||||||||||||||||||||||| Sbjct 13254 TATGGCCGCTTGATGATCATGACTGATCAGGATCATGATGGTTCTCACATCAAGGGTCT 13196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596540360632480