Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3880 158 2e-33 seq2672 149 1e-30 seq2543 116 7e-21 seq175 116 7e-21 seq3789 95.1 2e-14 >seq3880 Length=130811 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 |||||||| || || | ||||| ||| | ||| | || || |||||||| ||| | Sbjct 118852 CCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATAATCGCTT 118793 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 || || | | ||| |||| |||||| || ||||| || | ||| |||||||| || || Sbjct 118792 AATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 118733 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || |||||||| ||||| ||||| |||| | ||| ||| ||||||||||| |||||| Sbjct 118732 ATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAAGATTCAACT 118673 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||| || || ||||| ||||| || || || || ||||||||||| Sbjct 118672 TCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACGAATATTTGCAT 118626 Score = 141 bits (156), Expect = 2e-28 Identities = 173/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| |||| || || | ||| | || | || || ||||||| Sbjct 118633 ATTTGCATACCACCTCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTA 118574 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| | || | | ||| ||||||||||| || |||||||| | | |||||| Sbjct 118573 TAGTCACTGAGAGTACGACCATCCTCTAATTGTTTGCCAGCAAAAATGAGACGTTGTTGA 118514 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || ||||| |||||||| || || |||| || ||| |||| ||| Sbjct 118513 TCAGGAGGAATGCCTTCCTTATCTTGAATCTTTTGCTTTACGTTATCGATACTATCAGAA 118454 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||||| ||| ||||||||||| || || || || ||||| |||||||| Sbjct 118453 GATTCAACTTCTAAAGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTGCAT 118398 >seq2672 Length=76086 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 |||||||| || || | ||||| ||| | || | ||||| ||||| || || | Sbjct 17616 CCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACTT 17675 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 || || | | ||| || | |||||| || |||||||||| ||| || ||||| || || Sbjct 17676 AAAGTACGACCATCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGCTGATCTGGTGGG 17735 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || ||||| |||||||| |||||| |||| | ||| |||||||||||| || |||||| Sbjct 17736 ATACCTTCCTTATCTTGAATTTTGCTTTTCACATTATCAATAGTATCGGAGGATTCAACT 17795 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||| || || || || ||||| || || || ||||| |||||||| Sbjct 17796 TCTAATGTGATTGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 17842 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| | || ||||||||||| | || | ||||| ||||||| Sbjct 17835 ATTTGCATACCACCTCGTAGTCTTAGTACCAGATGAAGGGTTGATTCTTTTTGAATATTA 17894 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| | || | ||| || |||||||| || ||||| || | | |||||| Sbjct 17895 TAGTCACTAAGGGTACGGCCATCTTCCAATTGTTTGCCTGCAAAGATGAGACGTTGTTGA 17954 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || |||||||||||||| || || |||| || |||| |||| ||| Sbjct 17955 TCTGGTGGGATACCTTCTTTATCTTGGATCTTTTGCTTTACGTTGTCAATACTATCAGAA 18014 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| | ||| ||||||||||| || || || || ||||| |||||||| Sbjct 18015 GATTCAACTTCCAAAGTAATAGTTTTACCAGTAAGAGTCTTCACAAAGATTTGCAT 18070 >seq2543 Length=10996 Score = 116 bits (128), Expect = 7e-21 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | ||||| |||| ||| | || | ||||| ||||| Sbjct 1480 AATTTGCATACCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATT 1421 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| ||||||||||| || |||||||| | | |||||| Sbjct 1420 GTAGTCTGAAAGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTG 1361 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || ||||| || ||||| || || || | ||| |||| |||| || Sbjct 1360 GTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGA 1301 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||| ||||| | || || |||||||| || || || || || || || ||||| Sbjct 1300 AGACTCGACTTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1244 >seq175 Length=1843 Score = 116 bits (128), Expect = 7e-21 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | ||||| |||| ||| | || | ||||| ||||| Sbjct 1252 AATTTGCATACCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATT 1193 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| ||||||||||| || |||||||| | | |||||| Sbjct 1192 GTAGTCTGAAAGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTG 1133 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || ||||| || ||||| || || || | ||| |||| |||| || Sbjct 1132 GTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGA 1073 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||| ||||| | || || |||||||| || || || || || || || ||||| Sbjct 1072 AGACTCGACTTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 116 bits (128), Expect = 7e-21 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | ||||| |||| ||| | || | ||||| ||||| Sbjct 1708 AATTTGCATACCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATT 1649 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| ||||||||||| || |||||||| | | |||||| Sbjct 1648 GTAGTCTGAAAGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTG 1589 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || ||||| || ||||| || || || | ||| |||| |||| || Sbjct 1588 GTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGA 1529 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||| ||||| | || || |||||||| || || || || || || || ||||| Sbjct 1528 AGACTCGACTTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1472 >seq3789 Length=135228 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || || ||||| || || | |||||||||||||| || ||||| || ||||| ||| Sbjct 104551 TGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGGATT 104492 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || || | ||| |||| |||| || || || || || | ||| || || || || Sbjct 104491 TTTTGCTTGACATTCTCAATACTATCAGAGGATTCGACCTCCAAAGTGATTGTCTTGCCA 104432 Query 193335 GTTAGCGTTTTTACAAATATTTGCATTTTA 193364 || || ||||| ||||| |||||||||||| Sbjct 104431 GTAAGTGTTTTAACAAAGATTTGCATTTTA 104402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899610305688720