Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3810 107 2e-17 seq2503 96.9 4e-14 seq2394 95.1 1e-13 seq2705 89.7 6e-12 seq2703 89.7 6e-12 >seq3810 Length=142081 Score = 107 bits (118), Expect = 2e-17 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| ||| | | ||| || || |||||||| ||||| || || | || Sbjct 84115 GCTTGGCGAGTTCACCGGGAAGGATGAGACGAACGGCGGTTTGGATTTCACGAGAAGAGA 84174 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| || |||| | ||| || | | | || || || | | Sbjct 84175 TGGTGGAACGCTTGTTGTAGGCGGCCAACTTGGAGGCTTCAGAGGCAATACGTTCAAAGA 84234 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || ||||||| || ||||| | |||||||||||| || ||| |||| Sbjct 84235 TATCGTTGACGAAGGAGTTCAAGATAGACATGGCCTTGTTGGAGATACCAGTGTCAGGGT 84294 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | |||||||||||| | || ||||| Sbjct 84295 GAACTTGCTTCAAGACCTTGTAGATGTAAGAAGAGTA 84331 >seq2503 Length=34491 Score = 96.9 bits (106), Expect = 4e-14 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||||||||| |||| ||||| ||| || || || | | |||||||| | || || || Sbjct 7141 ACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGCATCAAACCACGTTT 7200 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| | ||||||||||| | ||| || || || |||||||| ||||| |||||||| Sbjct 7201 CTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCTTCGACAGCGGCAAA 7260 Query 869299 GCCGATGAGCCGCTCGGCAAAGG 869321 | ||| || || || ||||||| Sbjct 7261 GGCGACCAGACGTTCAGCAAAGG 7283 >seq2394 Length=78826 Score = 95.1 bits (104), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | || || || || ||||| ||||| || || | || Sbjct 1101 GCTTGGCGAGTTCACCAGGGAGAATAAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 1042 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| || |||| | ||| || | | |||| || || | | Sbjct 1041 TGGTGGAACGCTTGTTGTAGGCAGCCAACTTGGAGGCTTCAGAGGCGATACGTTCAAAGA 982 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||||||||| || ||||||| Sbjct 981 TATCATTGACAAAGGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCAGTATCGGGGT 922 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | ||||||||||| | || ||||| Sbjct 921 GAACTTGCTTCAAGACCTTGTAGATATAAGAGGAGTA 885 >seq2705 Length=35774 Score = 89.7 bits (98), Expect = 6e-12 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | || || || || ||||| ||||| || || | || Sbjct 20624 GCTTGGCGAGTTCACCAGGAAGAATAAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 20683 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| || |||| | ||| || | | |||| || || | | Sbjct 20684 TGGTGGAACGCTTGTTGTAGGCAGCCAACTTGGAGGCTTCAGAGGCGATACGTTCAAAGA 20743 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||| ||||| || || |||| Sbjct 20744 TATCATTGACAAAGGAGTTCAAGATGGACATGGCCTTGTTAGAGATACCAGTATCAGGGT 20803 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | |||||||||||| | || ||||| Sbjct 20804 GAACTTGCTTCAAGACCTTGTAGATGTAAGAAGAGTA 20840 >seq2703 Length=133504 Score = 89.7 bits (98), Expect = 6e-12 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | || || || || ||||| ||||| || || | || Sbjct 3424 GCTTGGCGAGTTCACCAGGGAGAATAAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 3365 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| || |||| | ||| || | | |||| || || | | Sbjct 3364 TGGTGGAACGCTTGTTGTAGGCAGCCAACTTGGAGGCTTCAGAGGCGATACGTTCAAAGA 3305 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || ||||| || ||||||| || ||||| | |||||||||||| || ||||||| Sbjct 3304 TATCATTGACGAAAGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCAGTATCGGGGT 3245 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | ||||||||||| | || ||||| Sbjct 3244 GAACTTGCTTCAAGACCTTGTAGATATAAGAGGAGTA 3208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106817424377957