Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3810 150 3e-30 seq2394 145 1e-28 seq2703 141 1e-27 seq2705 132 8e-25 seq2503 93.3 7e-13 >seq3810 Length=142081 Score = 150 bits (166), Expect = 3e-30 Identities = 180/242 (74%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || |||||||||||| |||| ||||| ||| | | Sbjct 84076 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACGGCGTGCTTGGCGAGTTCACCGGGAA 84135 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || |||||||| ||||| || || | ||| ||| |||||||| || Sbjct 84136 GGATGAGACGAACGGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAG 84194 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || | | | || || || | || |||||||| || |||||| Sbjct 84195 GCGGCCAACTTGGAGGCTTCAGAGGCAATACGTTCAAAGATATCGTTGACGAAGGAGTTC 84254 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || ||| ||||| || ||||| | |||||| Sbjct 84255 AAGATAGACATGGCCTTGTTGGAGATACCAGTGTCAGGGTGAACTTGCTTCAAGACCTTG 84314 Query 1485709 TA 1485710 || Sbjct 84315 TA 84316 >seq2394 Length=78826 Score = 145 bits (160), Expect = 1e-28 Identities = 188/257 (73%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||||||||| || || ||||||||| |||| ||||| || | | Sbjct 1140 TGTACTTGGTGACGGCCTTGGTACCTTCAGAAACGGCGTGCTTGGCGAGTTCACCAGGGA 1081 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || ||||| ||||| || || | ||| ||| |||||||| || Sbjct 1080 GAATAAGACGAACAGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAG 1022 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || | | |||| || || | || || |||||||| |||||| Sbjct 1021 GCAGCCAACTTGGAGGCTTCAGAGGCGATACGTTCAAAGATATCATTGACAAAGGAGTTC 962 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || |||||||| || ||||| | |||||| Sbjct 961 AAGATGGACATGGCCTTGTTGGAGATACCAGTATCGGGGTGAACTTGCTTCAAGACCTTG 902 Query 1485709 TAAACAAAGGACGAGTA 1485725 || | | | || ||||| Sbjct 901 TAGATATAAGAGGAGTA 885 >seq2703 Length=133504 Score = 141 bits (156), Expect = 1e-27 Identities = 187/257 (73%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||||||||| || || ||||||||| |||| ||||| || | | Sbjct 3463 TGTACTTGGTGACGGCCTTGGTACCTTCAGAAACGGCGTGCTTGGCGAGTTCACCAGGGA 3404 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || ||||| ||||| || || | ||| ||| |||||||| || Sbjct 3403 GAATAAGACGAACAGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAG 3345 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || | | |||| || || | || || ||||| || |||||| Sbjct 3344 GCAGCCAACTTGGAGGCTTCAGAGGCGATACGTTCAAAGATATCATTGACGAAAGAGTTC 3285 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || |||||||| || ||||| | |||||| Sbjct 3284 AAGATGGACATGGCCTTGTTGGAGATACCAGTATCGGGGTGAACTTGCTTCAAGACCTTG 3225 Query 1485709 TAAACAAAGGACGAGTA 1485725 || | | | || ||||| Sbjct 3224 TAGATATAAGAGGAGTA 3208 >seq2705 Length=35774 Score = 132 bits (146), Expect = 8e-25 Identities = 176/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || |||||||||||| |||| ||||| || | | Sbjct 20585 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACGGCGTGCTTGGCGAGTTCACCAGGAA 20644 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || ||||| ||||| || || | ||| ||| |||||||| || Sbjct 20645 GAATAAGACGAACAGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAG 20703 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || | | |||| || || | || || |||||||| |||||| Sbjct 20704 GCAGCCAACTTGGAGGCTTCAGAGGCGATACGTTCAAAGATATCATTGACAAAGGAGTTC 20763 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||| ||||| || || ||||| || ||||| | |||||| Sbjct 20764 AAGATGGACATGGCCTTGTTAGAGATACCAGTATCAGGGTGAACTTGCTTCAAGACCTTG 20823 Query 1485709 TA 1485710 || Sbjct 20824 TA 20825 >seq2503 Length=34491 Score = 93.3 bits (102), Expect = 7e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||| |||| ||||||||| || || || | |||||||| | || || || Sbjct 7141 ACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGCATCAAACCACGTTT 7200 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| | ||||||||||| ||| || || || |||||||| ||||| |||||||| Sbjct 7201 CTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCTTCGACAGCGGCAAA 7260 Query 794460 GCCGACGAGCCGCTCGGCAAA 794480 | |||| || || || ||||| Sbjct 7261 GGCGACCAGACGTTCAGCAAA 7281 Score = 89.7 bits (98), Expect = 8e-12 Identities = 149/210 (71%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 793926 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCC 793985 || ||||||||||||||||| | || ||||||| ||||| | ||| ||||| | Sbjct 6854 TCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTCCATAAAGTCGAATGGGTTAGAG 6913 Query 793986 GTCAGGTAGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | ||| ||| || | || || |||| || | || || || ||||||||||||| Sbjct 6914 GCATTGTAAATCTTGTCAAAGCCAAGGGCGAC-CATG-AGACGATCAGCGACGAATTCAA 6971 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGA 794103 ||||||| ||||| | || |||||||| ||||| | ||||| ||||| | | | || Sbjct 6972 TGTACTGACACATCAAGGTAGCGTTCATACCGATCAATGCCACAGGCAGAGCAT--CCGA 7029 Query 794104 CA--AACTCTTTCTCGATCTCGACGGCCTC 794131 || || |||| ||||| |||| || || Sbjct 7030 CAGGAATTCTTGTTCGATACCGACTGCTTC 7059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915829305346319