Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2543 98.7 6e-16 seq175 95.1 8e-15 >seq2543 Length=10996 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| || || |||||||| ||||| | | || |||| Sbjct 2139 AGGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCT 2080 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||||| ||||| || || | || | || |||||||| Sbjct 2079 TCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCT 2020 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| |||||| | | || ||| | |||||| || | ||| ||||| Sbjct 2019 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1960 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || |||||||| Sbjct 1959 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1928 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| || || |||||||| ||||| | | || |||| Sbjct 1227 AGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCT 1168 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||||| ||||| || || | || | || |||||||| Sbjct 1167 TCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCT 1108 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| |||||| | | || ||| | |||||| || | ||| ||||| Sbjct 1107 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1048 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || |||||||| Sbjct 1047 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| || | ||| || || || || || ||||| || ||| | || |||| Sbjct 1455 AGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCT 1396 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||| || || || || || || || || |||||| | || | || |||||||| Sbjct 1395 TCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCT 1336 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| |||||| | | || ||| | |||||| || | ||| ||||| Sbjct 1335 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1276 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || |||||||| Sbjct 1275 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1244 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| || || |||||||| ||||| | | || |||| Sbjct 1911 AGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCT 1852 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||||| ||||| || || | || | || |||||||| Sbjct 1851 TCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCT 1792 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| |||||| | | || ||| | |||||| || | ||| ||||| Sbjct 1791 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1732 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || |||||||| Sbjct 1731 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1700 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| || || |||||||| ||||| | | || |||| Sbjct 999 AGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCT 940 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||||| ||||| || || | || | || |||||||| Sbjct 939 TCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCT 880 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || ||||| ||||| || || || ||| | ||||| || | || || | Sbjct 879 TGAATCTTTTGCTTGAC--ATTCTCAATGCTATCAGAAGATTCGACTTCTAAAGTGATAG 822 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||| || || |||||||||||||| |||||| Sbjct 821 TCTTTCCGGTAAGAGTCTTTACAAAGATTTGCATG 787 >seq175 Length=1843 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| || | ||| || || || || || ||||| || ||| | || |||| Sbjct 1227 AGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCT 1168 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||| || || || || || || || || |||||| | || | || |||||||| Sbjct 1167 TCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCT 1108 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| |||||| | | || ||| | |||||| || | ||| ||||| Sbjct 1107 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1048 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || |||||||| Sbjct 1047 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| || | ||| || || || || || ||||| || ||| | || |||| Sbjct 1683 AGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCT 1624 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||| || || || || || || || || |||||| | || | || |||||||| Sbjct 1623 TCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCT 1564 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| |||||| | | || ||| | |||||| || | ||| ||||| Sbjct 1563 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1504 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || |||||||| Sbjct 1503 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1472 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| || || |||||||| ||||| | | || |||| Sbjct 999 AGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCT 940 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||||| ||||| || || | || | || |||||||| Sbjct 939 TCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCT 880 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || ||||| ||||| || || || ||| | ||||| || | || || | Sbjct 879 TGAATCTTTTGCTTGAC--ATTCTCAATGCTATCAGAAGATTCGACTTCTAAAGTGATAG 822 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||| || || |||||||||||||| |||||| Sbjct 821 TCTTTCCGGTAAGAGTCTTTACAAAGATTTGCATG 787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325677236057099