Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3880 82.4 6e-11 >seq3880 Length=130811 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 107550 TTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG 107609 |||| ||||||||||||||||| || | || || ||||| || || | ||| || Sbjct 118392 TTTATTATGCAAATTTTTGTCAAGACCCTTACTGGTAAAACTATCACTTTAGAAGTTGAA 118451 Query 107610 GCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTG 107669 || |||| | ||| | ||||| ||||||||| ||||| |||||| | || Sbjct 118452 TCTTCTGATAGTATCGATAACGTAAAGCAAAAGATTCAAGATAAGGAAGGCATTCCTCCT 118511 Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 ||||| || | || |||| ||| || ||||| | ||||| | || | ||| Sbjct 118512 GATCAACAACGTCTCATTTTTGCTGGCAAACAATTAGAGGATGGTCGTACTCTCAGTGAC 118571 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || ||||||||||| || || | || | ||| | ||||| ||||| || Sbjct 118572 TATAATATTCAAAAGGAATCAACTCTTCATTTAGTGCTAAGATTACGAGGTGG 118624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398857738799569