Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq3880 194 3e-44 seq2672 165 1e-35 seq2543 109 9e-19 seq175 109 9e-19 seq2895 84.2 3e-11 >seq3880 Length=130811 Score = 194 bits (214), Expect = 3e-44 Identities = 183/232 (79%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | || || | ||||| |||||||| || | || || ||| | || Sbjct 118627 TGCAAATATTCGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCCG 118686 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| |||| |||||| ||| |||||||| |||||||| ||||||| Sbjct 118687 ATACCATTGATAATGTGAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAAC 118746 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| || ||||| || |||||| |||| ||| | | || |||| |||||||||| Sbjct 118747 AAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAATA 118806 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATA 146263 ||||||| ||||| || ||||||| |||||||| |||||||| || ||||| Sbjct 118807 TACAAAAGGAATCAACACTCCATTTGGTATTACGTTTAAGAGGTGG-AAATA 118857 Score = 141 bits (156), Expect = 1e-28 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || ||||| || ||| | || || ||| | | Sbjct 118399 TGCAAATTTTTGTCAAGACCCTTACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCTG 118458 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| ||| | || ||||| | || || ||| ||| ||||||||||| || ||||||| Sbjct 118459 ATAGTATCGATAACGTAAAGCAAAAGATTCAAGATAAGGAAGGCATTCCTCCTGATCAAC 118518 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||||||||| || ||||||||||| ||| | | || | | || ||||||| Sbjct 118519 AACGTCTCATTTTTGCTGGCAAACAATTAGAGGATGGTCGTACTCTCAGTGACTATAATA 118578 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||| ||||| ||| | |||||||| || ||||| |||| |||| ||||||| Sbjct 118579 TTCAAAAGGAATCAACTCTTCATTTAGTGCTAAGATTACGAGGTGGTATGCAAATATT 118636 >seq2672 Length=76086 Score = 165 bits (182), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | ||||| || ||||| || | || || ||| || Sbjct 17841 TGCAAATCTTTGTTAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCCG 17782 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| |||| ||||| ||| ||| ||||| || ||||| ||||| | Sbjct 17781 ATACTATTGATAATGTGAAAAGCAAAATTCAAGATAAGGAAGGTATCCCACCAGATCAGC 17722 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| ||||||||| | || ||| | | || |||| ||||| |||| Sbjct 17721 AAAGACTAATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACTTTAAGTGATTACAATA 17662 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAA 146260 ||||||||||||| || | ||||| |||||||| |||||||| || || Sbjct 17661 TACAAAAAGAATCAACGCTTCATTTGGTATTACGTTTAAGAGGTGGAAA 17613 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || ||||| |||||| | || || ||| | | Sbjct 18069 TGCAAATCTTTGTGAAGACTCTTACTGGTAAAACTATTACTTTGGAAGTTGAATCTTCTG 18010 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| |||| | || ||||| | || || ||| ||||||||| || ||||| ||||||| Sbjct 18009 ATAGTATTGACAACGTAAAGCAAAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAAC 17950 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||| |||||||| |||||||| || ||| | || | | || ||||||| Sbjct 17949 AACGTCTCATCTTTGCAGGCAAACAATTGGAAGATGGCCGTACCCTTAGTGACTATAATA 17890 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || | ||| | ||| || || || |||| |||| Sbjct 17889 TTCAAAAAGAATCAACCCTTCATCTGGTACTAAGACTACGAGGTGGTA 17842 >seq2543 Length=10996 Score = 109 bits (120), Expect = 9e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || ||||| ||||| | || || || | | Sbjct 1245 TGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTG 1304 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| |||| |||| || || | || || ||| || |||||||| || || || |||| Sbjct 1305 ATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCAAC 1364 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| |||||||||||||| ||| | || | |||| || |||| Sbjct 1365 AGCGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAATA 1424 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| ||||||| || Sbjct 1425 TCCAAAAAGAATCCACTCTCCATTTGGT 1452 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | |||||| | || ||||| || || ||| | || || || | | Sbjct 1473 TGCAAATTTTCGTCAAAACACTTACCGGAAAGACTATCACTTTGGAGGTCGAGTCTTCTG 1532 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| ||| | ||||| || | || || ||| || ||||| ||||| |||||||||| Sbjct 1533 ATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAAC 1592 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| | || ||| | || || | || || || | Sbjct 1593 AACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACA 1652 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| | || || || Sbjct 1653 TTCAAAAAGAATCCACTCTTCACTTGGT 1680 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| || | || ||||| || || ||| | || || ||| | | Sbjct 789 TGCAAATCTTTGTAAAGACTCTTACCGGAAAGACTATCACTTTAGAAGTCGAATCTTCTG 848 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| ||| | ||||| || | || || ||| || ||||| ||||| |||||||||| Sbjct 849 ATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAAC 908 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| | || ||| | || || | || || || | Sbjct 909 AACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACA 968 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| | || || || Sbjct 969 TTCAAAAAGAATCCACTCTTCACTTGGT 996 Score = 87.8 bits (96), Expect = 3e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || ||||| ||||| | || || || | | Sbjct 1017 TGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTG 1076 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| |||| |||| || || | || || ||| || ||||| ||||| |||||||||| Sbjct 1077 ATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAAC 1136 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| | || ||| | || || | || || || | Sbjct 1137 AACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACA 1196 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| | || || || Sbjct 1197 TTCAAAAAGAATCCACTCTTCACTTGGT 1224 Score = 87.8 bits (96), Expect = 3e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || ||||| ||||| | || || || | | Sbjct 1701 TGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTG 1760 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| |||| |||| || || | || || ||| || ||||| ||||| |||||||||| Sbjct 1761 ATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAAC 1820 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| | || ||| | || || | || || || | Sbjct 1821 AACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACA 1880 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| | || || || Sbjct 1881 TTCAAAAAGAATCCACTCTTCACTTGGT 1908 Score = 87.8 bits (96), Expect = 3e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || ||||| ||||| | || || || | | Sbjct 1929 TGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTG 1988 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| |||| |||| || || | || || ||| || ||||| ||||| |||||||||| Sbjct 1989 ATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAAC 2048 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| | || ||| | || || | || || || | Sbjct 2049 AACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACA 2108 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| | || || || Sbjct 2109 TTCAAAAAGAATCCACTCTTCACTTGGT 2136 >seq175 Length=1843 Score = 109 bits (120), Expect = 9e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || ||||| ||||| | || || || | | Sbjct 1017 TGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTG 1076 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| |||| |||| || || | || || ||| || |||||||| || || || |||| Sbjct 1077 ATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCAAC 1136 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| |||||||||||||| ||| | || | |||| || |||| Sbjct 1137 AGCGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAATA 1196 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| ||||||| || Sbjct 1197 TCCAAAAAGAATCCACTCTCCATTTGGT 1224 Score = 109 bits (120), Expect = 9e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || ||||| ||||| | || || || | | Sbjct 1473 TGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTG 1532 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| |||| |||| || || | || || ||| || |||||||| || || || |||| Sbjct 1533 ATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCAAC 1592 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| |||||||||||||| ||| | || | |||| || |||| Sbjct 1593 AGCGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAATA 1652 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| ||||||| || Sbjct 1653 TCCAAAAAGAATCCACTCTCCATTTGGT 1680 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | |||||| | || ||||| || || ||| | || || || | | Sbjct 1245 TGCAAATTTTCGTCAAAACACTTACCGGAAAGACTATCACTTTGGAGGTCGAGTCTTCTG 1304 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| ||| | ||||| || | || || ||| || ||||| ||||| |||||||||| Sbjct 1305 ATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAAC 1364 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| | || ||| | || || | || || || | Sbjct 1365 AACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACA 1424 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| | || || || Sbjct 1425 TTCAAAAAGAATCCACTCTTCACTTGGT 1452 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| || | || ||||| || || ||| | || || ||| | | Sbjct 789 TGCAAATCTTTGTAAAGACTCTTACCGGAAAGACTATCACTTTAGAAGTCGAATCTTCTG 848 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| ||| | ||||| || | || || ||| || ||||| ||||| |||||||||| Sbjct 849 ATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAAC 908 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| | || ||| | || || | || || || | Sbjct 909 AACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACA 968 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| ||| | || || || Sbjct 969 TTCAAAAAGAATCCACTCTTCACTTGGT 996 >seq2895 Length=151278 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||||| || | || || ||| || ||||| ||||| || |||||| Sbjct 146061 GACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 146002 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | |||||||| || ||||||||||| || ||| | | || || | || || || Sbjct 146001 CAACGTCTCATTTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGAGTGACTACAAC 145942 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGT 146239 || ||||| ||||| ||| | || || || Sbjct 145941 ATTCAAAAGGAATCCACTCTTCACTTGGT 145913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786127868019320