Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2543 141 9e-29 seq175 141 9e-29 seq3880 127 2e-24 seq2672 123 2e-23 seq3785 87.8 2e-12 >seq2543 Length=10996 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| || |||| || ||||||||||| |||||||| || ||| Sbjct 1698 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1639 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||||||||||||||||||| |||||| |||||| ||||||||||| Sbjct 1638 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 1579 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||||| || | | || | | || | | || || Sbjct 1578 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACC 1519 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | ||||| ||||| | |||||| ||||| ||||||||| Sbjct 1518 TCCAAAGTGATAGTCTTTCCGGTAAGTGTTTTGACGAAAATTTGCATA 1471 Score = 140 bits (154), Expect = 3e-28 Identities = 171/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| || |||| || ||||||||||| |||||||| || ||| Sbjct 1014 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 955 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||||||||||||||||||| |||||| |||||| ||||||||||| Sbjct 954 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 895 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||||| || | | || | | || | | ||| ||| Sbjct 894 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACT 835 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTT 137416 || | ||| | ||||| ||||| | || ||||| || |||||||| |||| Sbjct 834 TCTAAAGTGATAGTCTTTCCGGTAAGAGTCTTTACAAAGATTTGCAT-GCTT 784 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| || |||| || ||||||||||| |||||||| || ||| Sbjct 1242 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1183 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||||||||||||||||||| |||||| |||||| ||||||||||| Sbjct 1182 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 1123 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||||| || | | ||| | | || | | || ||| Sbjct 1122 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1063 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | || || || || | || || ||||| || |||||| Sbjct 1062 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCATA 1015 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| || |||| || ||||||||||| |||||||| || ||| Sbjct 1926 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1867 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||||||||||||||||||| |||||| |||||| ||||||||||| Sbjct 1866 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 1807 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||||| || | | ||| | | || | | || ||| Sbjct 1806 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1747 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | || || || || | || || ||||| || |||||| Sbjct 1746 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCATA 1699 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | || || |||| || ||||||||||| |||||||| || ||| Sbjct 2154 CCGCCACGAAGACGAAGGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 2095 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||||||||||||||||||| |||||| |||||| ||||||||||| Sbjct 2094 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 2035 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||||| || | | ||| | | || | | || ||| Sbjct 2034 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1975 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | || || || || | || || ||||| || |||||| Sbjct 1974 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCATA 1927 >seq175 Length=1843 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| || |||| || ||||||||||| |||||||| || ||| Sbjct 1470 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1411 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||||||||||||||||||| |||||| |||||| ||||||||||| Sbjct 1410 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 1351 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||||| || | | || | | || | | || || Sbjct 1350 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACC 1291 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | ||||| ||||| | |||||| ||||| ||||||||| Sbjct 1290 TCCAAAGTGATAGTCTTTCCGGTAAGTGTTTTGACGAAAATTTGCATA 1243 Score = 140 bits (154), Expect = 3e-28 Identities = 171/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| || |||| || ||||||||||| |||||||| || ||| Sbjct 1014 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 955 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||||||||||||||||||| |||||| |||||| ||||||||||| Sbjct 954 AAAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGA 895 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||||| || | | || | | || | | ||| ||| Sbjct 894 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACT 835 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTT 137416 || | ||| | ||||| ||||| | || ||||| || |||||||| |||| Sbjct 834 TCTAAAGTGATAGTCTTTCCGGTAAGAGTCTTTACAAAGATTTGCAT-GCTT 784 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 137268 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 137327 |||||||||| |||||| |||||| ||||||||||| || ||||| ||||| ||| || Sbjct 1843 TTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGAATCTT 1784 Query 137328 TTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 137387 ||| || | | || | | || | | || || || | ||| | ||||| ||||| Sbjct 1783 TTGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAAGTGATAGTCTTTCCGGT 1724 Query 137388 CAATGTTTTTACGAATATTTGCATA 137412 | |||||| ||||| ||||||||| Sbjct 1723 AAGTGTTTTGACGAAAATTTGCATA 1699 >seq3880 Length=130811 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| |||||| || || ||||| | ||| ||||| |||||||| || |||||||| Sbjct 118852 CCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATAATCGCTT 118793 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||||| |||||||| |||||| |||| || | ||| ||||| || || Sbjct 118792 AATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 118733 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| |||||| ||| | | || | || || | | ||| ||| Sbjct 118732 ATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAAGATTCAACT 118673 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | || ||||| || | || || ||||||||||||||| Sbjct 118672 TCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACGAATATTTGCATA 118625 >seq2672 Length=76086 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| |||||| || || ||||||| || |||||||||||||| |||||||| || Sbjct 17616 CCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACTT 17675 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||| ||||||||||||||| | || || | ||||||||| || || Sbjct 17676 AAAGTACGACCATCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGCTGATCTGGTGGG 17735 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| || || |||||| ||| | | || | || || | || ||| ||| Sbjct 17736 ATACCTTCCTTATCTTGAATTTTGCTTTTCACATTATCAATAGTATCGGAGGATTCAACT 17795 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | |||||||| || | || || || || ||||||||| Sbjct 17796 TCTAATGTGATTGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCATA 17843 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || ||||||| | | || | ||||| || ||||||||||| || || || || || Sbjct 17844 CCACCTCGTAGTCTTAGTACCAGATGAAGGGTTGATTCTTTTTGAATATTATAGTCACTA 17903 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||| | |||||| || ||| |||| |||||||| ||||| || || Sbjct 17904 AGGGTACGGCCATCTTCCAATTGTTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGG 17963 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || |||||||| || || ||||| |||| | || | | || | | ||| ||| Sbjct 17964 ATACCTTCTTTATCTTGGATCTTTTGCTTTACGTTGTCAATACTATCAGAAGATTCAACT 18023 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | || || || || | || || || || ||||||||| Sbjct 18024 TCCAAAGTAATAGTTTTACCAGTAAGAGTCTTCACAAAGATTTGCATA 18071 >seq3785 Length=127354 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| || |||| || ||||| ||||| ||||||||||||||| Sbjct 87297 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCGCTC 87356 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||||| | ||| ||||||||| |||| |||||||| || || ||||| Sbjct 87357 AAAGTACGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGGTCAGGAGGA 87416 Query 137305 ATGCCT 137310 || ||| Sbjct 87417 ATACCT 87422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488520055237200