Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2543 107 5e-18 seq175 107 5e-18 seq3850 89.7 1e-12 seq3789 89.7 1e-12 seq2895 89.7 1e-12 seq2672 89.7 1e-12 seq3880 87.8 4e-12 >seq2543 Length=10996 Score = 107 bits (118), Expect = 5e-18 Identities = 155/214 (72%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA-CAGT 206237 |||| ||| || || || ||||| || |||||||| ||||| ||| |||||| | || | Sbjct 797 TTTGTAAAGACTCTTACCGGAAAGACTATCACTTTAGAAGTCGAATCTTCTGATAGCATT 856 Query 206238 C-GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 |||| || ||||||||||||||||| || ||||| ||| || || ||| | Sbjct 857 GAGAAT--GTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAACAACGTT 914 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 | ||||| || || || || | |||||||| | |||||| || |||||| | || | Sbjct 915 TGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACATTCAAA 974 Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||| || ||||||||| | ||| | | ||||| Sbjct 975 AAGAATCCACTCTTCACTTGGTTCTCCGTCTTCG 1008 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || ||||| || || |||||||| || |||||| Sbjct 1019 CAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTGAT 1078 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||||||||||||||||| || ||||| ||| || || ||| Sbjct 1079 AGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAACAA 1138 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| || || || || | |||||||| | |||||| || |||||| | Sbjct 1139 CGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACATT 1198 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| || ||||||||| | ||| | | ||||| Sbjct 1199 CAAAAAGAATCCACTCTTCACTTGGTTCTCCGTCTTCG 1236 Score = 105 bits (116), Expect = 2e-17 Identities = 151/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA-CAGT-CGAA 206241 |||||| || || ||||| || ||||||||||| || || |||||| | || | ||| Sbjct 1486 CAAAACACTTACCGGAAAGACTATCACTTTGGAGGTCGAGTCTTCTGATAGCATTGAGAA 1545 Query 206242 TCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 | || ||||||||||||||||| || ||||| ||| || || ||| | | ||| Sbjct 1546 T--GTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAACAACGTTTGATC 1603 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || || || || || | |||||||| | |||||| || |||||| | || ||||| Sbjct 1604 TTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACATTCAAAAAGAA 1663 Query 206362 TCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||||||| | ||| | | ||||| Sbjct 1664 TCCACTCTTCACTTGGTTCTCCGTCTTCG 1692 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || ||||| || || |||||||| || |||||| Sbjct 1703 CAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTGAT 1762 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||||||||||||||||| || ||||| ||| || || ||| Sbjct 1763 AGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAACAA 1822 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| || || || || | |||||||| | |||||| || |||||| | Sbjct 1823 CGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACATT 1882 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| || ||||||||| | ||| | | ||||| Sbjct 1883 CAAAAAGAATCCACTCTTCACTTGGTTCTCCGTCTTCG 1920 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || ||||| || || |||||||| || |||||| Sbjct 1931 CAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTGAT 1990 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||||||||||||||||| || ||||| ||| || || ||| Sbjct 1991 AGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAACAA 2050 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| || || || || | |||||||| | |||||| || |||||| | Sbjct 2051 CGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACATT 2110 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || ||||| || ||||||||| Sbjct 2111 CAAAAAGAATCCACTCTTCAC 2131 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || ||||| || || |||||||| || |||||| Sbjct 1247 CAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTGAT 1306 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||||||||||||||||| || ||||| || || ||| || Sbjct 1307 AGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCAACAG 1366 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || || || || |||||||| | || | | || ||||| || Sbjct 1367 CGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAATATC 1426 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || ||||| || ||||| || Sbjct 1427 CAAAAAGAATCCACTCTCCA 1446 >seq175 Length=1843 Score = 107 bits (118), Expect = 5e-18 Identities = 155/214 (72%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA-CAGT 206237 |||| ||| || || || ||||| || |||||||| ||||| ||| |||||| | || | Sbjct 797 TTTGTAAAGACTCTTACCGGAAAGACTATCACTTTAGAAGTCGAATCTTCTGATAGCATT 856 Query 206238 C-GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 |||| || ||||||||||||||||| || ||||| ||| || || ||| | Sbjct 857 GAGAAT--GTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAACAACGTT 914 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 | ||||| || || || || | |||||||| | |||||| || |||||| | || | Sbjct 915 TGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACATTCAAA 974 Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||| || ||||||||| | ||| | | ||||| Sbjct 975 AAGAATCCACTCTTCACTTGGTTCTCCGTCTTCG 1008 Score = 105 bits (116), Expect = 2e-17 Identities = 151/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA-CAGT-CGAA 206241 |||||| || || ||||| || ||||||||||| || || |||||| | || | ||| Sbjct 1258 CAAAACACTTACCGGAAAGACTATCACTTTGGAGGTCGAGTCTTCTGATAGCATTGAGAA 1317 Query 206242 TCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 | || ||||||||||||||||| || ||||| ||| || || ||| | | ||| Sbjct 1318 T--GTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAACAACGTTTGATC 1375 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || || || || || | |||||||| | |||||| || |||||| | || ||||| Sbjct 1376 TTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAACATTCAAAAAGAA 1435 Query 206362 TCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||||||| | ||| | | ||||| Sbjct 1436 TCCACTCTTCACTTGGTTCTCCGTCTTCG 1464 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || ||||| || || |||||||| || |||||| Sbjct 1019 CAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTGAT 1078 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||||||||||||||||| || ||||| || || ||| || Sbjct 1079 AGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCAACAG 1138 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || || || || |||||||| | || | | || ||||| || Sbjct 1139 CGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAATATC 1198 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || ||||| || ||||| || Sbjct 1199 CAAAAAGAATCCACTCTCCA 1218 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || ||||| || || |||||||| || |||||| Sbjct 1475 CAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCTGAT 1534 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||||||||||||||||| || ||||| || || ||| || Sbjct 1535 AGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCAACAG 1594 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || || || || |||||||| | || | | || ||||| || Sbjct 1595 CGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAATATC 1654 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || ||||| || ||||| || Sbjct 1655 CAAAAAGAATCCACTCTCCA 1674 >seq3850 Length=152326 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 || |||||||| | || || ||||||||||||||||| || ||||| ||| || Sbjct 95421 AGCTCTGACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCT 95362 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| ||| | || || |||||||| || || || ||||| || | |||||| ||| Sbjct 95361 GACCAACAACGTCTCATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTTTGAGCGAC 95302 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| | || || || || || |||||| | ||| | | ||||| Sbjct 95301 TACAACATTCAAAAGGAATCCACCCTTCACTTGGTTCTCCGTCTTCG 95255 >seq3789 Length=135228 Score = 89.7 bits (98), Expect = 1e-12 Identities = 157/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 206163 TAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA 206222 ||||||| || || ||| ||||| || || || || || ||||||||||| || || Sbjct 104402 TAAAATG---CAAATCTTTGTTAAAACACTTACTGGCAAGACAATCACTTTGGAGGTCGA 104458 Query 206223 AAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 | ||||| | | || || |||||||| || ||||| || ||||| ||| || Sbjct 104459 ATCCTCTGATAGTATTGAGAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCTCC 104518 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || ||| | | ||||| || || |||||| | |||||||| | |||||| || Sbjct 104519 TGATCAACAACGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACTTTGAGTGA 104578 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| | || || || || ||||| ||| | ||| | | ||||| Sbjct 104579 CTACAACATTCAAAAGGAATCCACTCTCCACTTGGTTCTCCGTCTTCG 104626 >seq2895 Length=151278 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 || |||||||| | || || ||||||||||||||||| || ||||| ||| || Sbjct 146067 AGCTCTGACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCT 146008 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 || ||| | || || |||||||| || || ||||||||||| | || ||| || Sbjct 146007 GATCAACAACGTCTCATTTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGAGTGAC 145948 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| | || || || || ||||||||| | ||| | | ||||| Sbjct 145947 TACAACATTCAAAAGGAATCCACTCTTCACTTGGTTCTCCGTCTTCG 145901 >seq2672 Length=76086 Score = 89.7 bits (98), Expect = 1e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || ||||| || ||||||||||| ||| |||||| | | || Sbjct 18055 AAGACTCTTACTGGTAAAACTATTACTTTGGAAGTTGAATCTTCTGATAGTATTGACAAC 17996 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||||||||||| ||||| |||||||| || || || ||| | || ||||| Sbjct 17995 GTAAAGCAAAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAACAACGTCTCATCTTT 17936 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || ||||||||||| | || | || || || | || ||||| || Sbjct 17935 GCAGGCAAACAATTGGAAGATGGCCGTACCCTTAGTGACTATAATATTCAAAAAGAATCA 17876 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||| || || | ||||| ||| Sbjct 17875 ACCCTTCATCTGGTACTAAGACTACGA 17849 >seq3880 Length=130811 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/195 (70%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || || || ||||| |||||||| ||||| ||| |||||| | | Sbjct 118406 TTTTGTCAAGACCCTTACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCTGATAGTAT 118465 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| |||||||||||||||||||| || ||||| ||| || || ||| | || Sbjct 118466 CGATAACGTAAAGCAAAAGATTCAAGATAAGGAAGGCATTCCTCCTGATCAACAACGTCT 118525 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || || || || || || || || ||||| | ||| | || || || | || || Sbjct 118526 CATTTTTGCTGGCAAACAATTAGAGGATGGTCGTACTCTCAGTGACTATAATATTCAAAA 118585 Query 206358 AGAGTCTACTCTTCA 206372 || || |||||||| Sbjct 118586 GGAATCAACTCTTCA 118600 Score = 84.2 bits (92), Expect = 5e-11 Identities = 141/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || ||||| ||| || || ||||| ||||| ||||| || ||||| ||| ||| || Sbjct 118629 CAAATATTCGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCCGAT 118688 Query 206233 ACAGTCGA--ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 || | || || | |||| |||| ||||||| |||||||| ||| || || | Sbjct 118689 ACCATTGATAATGTGAAAAGTAAAA--TTCAAGACAAAGAAGGTATTCCACCAGATCAAC 118746 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 ||||||||||||| || || || || | |||||||| | || || |||||| || Sbjct 118747 AAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAATA 118806 Query 206351 TCCAGAAAGAGTCTACTCTTCA 206372 | || || || || || || || Sbjct 118807 TACAAAAGGAATCAACACTCCA 118828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181761427908241