Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2672 149 6e-31 seq3880 134 1e-26 seq2543 122 8e-23 seq175 122 8e-23 seq3903 89.7 5e-13 >seq2672 Length=76086 Score = 149 bits (164), Expect = 6e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || || || | ||||| | ||||| ||| || | Sbjct 17842 ATGCAAATCTTTGTTAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 17783 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || ||| |||||| ||||| || ||||| || || |||||| Sbjct 17782 GATACTATTGATAATGTGAAAAGCAAAATTCAAGATAAGGAAGGTATCCCACCAGATCAG 17723 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||||| |||| | || |||||||| ||||||| | | | | | || ||||||||| Sbjct 17722 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACTTTAAGTGATTACAAT 17663 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 || ||||||||||| || ||||||| || ||| | || ||||| ||||| Sbjct 17662 ATACAAAAAGAATCAACGCTTCATTTGGTATTACGTTTAAGAGGTGGAAA 17613 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || || ||| | || || | ||||| ||| | Sbjct 18070 ATGCAAATCTTTGTGAAGACTCTTACTGGTAAAACTATTACTTTGGAAGTTGAATCTTCT 18011 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| ||| || | ||||| ||||| || |||||||| ||||| || || ||||| Sbjct 18010 GATAGTATTGACAACGTAAAGCAAAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAA 17951 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | ||||| | | ||||||||| | ||||||| | | | || || || ||| Sbjct 17950 CAACGTCTCATCTTTGCAGGCAAACAATTGGAAGATGGCCGTACCCTTAGTGACTATAAT 17891 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| ||| ||||| | || ||||| | |||| || Sbjct 17890 ATTCAAAAAGAATCAACCCTTCATCTGGTACTAAGACTACGAGGTGG 17844 >seq3880 Length=130811 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || || ||| | ||||| | ||||| ||| | Sbjct 118398 ATGCAAATTTTTGTCAAGACCCTTACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCT 118457 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| |||||| | ||||| ||||| ||| ||||| || || || || || ||||| Sbjct 118458 GATAGTATCGATAACGTAAAGCAAAAGATTCAAGATAAGGAAGGCATTCCTCCTGATCAA 118517 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | ||||||| | ||||||||| | || |||| | | | | |||| || || ||| Sbjct 118518 CAACGTCTCATTTTTGCTGGCAAACAATTAGAGGATGGTCGTACTCTCAGTGACTATAAT 118577 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| ||||| || ||||||||||| ||||||| |||| || Sbjct 118578 ATTCAAAAGGAATCAACTCTTCATTTAGTGCTAAGATTACGAGGTGG 118624 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || | || || ||| | ||||| | ||||| ||| | | Sbjct 118626 ATGCAAATATTCGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCC 118685 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | || ||| |||||| || ||||| ||||| || || ||||| Sbjct 118686 GATACCATTGATAATGTGAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 118745 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||||| || | | ||||||||||| ||||||| | | | | |||||||| ||| Sbjct 118746 CAAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAAT 118805 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 || ||||| ||||| || | ||||| || ||| | || ||||| ||||| Sbjct 118806 ATACAAAAGGAATCAACACTCCATTTGGTATTACGTTTAAGAGGTGGAAA 118855 >seq2543 Length=10996 Score = 122 bits (134), Expect = 8e-23 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 25164 AATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAG 25223 ||||| | | ||||||| | |||||||| || | |||||||| | ||||| | |||| Sbjct 777 AATTATAAAGCATGCAAATCTTTGTAAAGACTCTTACCGGAAAGACTATCACTTTAGAAG 836 Query 25224 TCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283 ||||| | |||| || ||| | || || ||||| ||| || || || ||||| | Sbjct 837 TCGAATCTTCTGATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTC 896 Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCA 25343 | |||||||| ||| | | || | | || |||||||||||||||| | | | | | Sbjct 897 CTCCCGATCAACAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGA 956 Query 25344 GCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGT 25383 | || ||||| ||||||||||||||||| |||| || || Sbjct 957 GTGACTACAACATTCAAAAAGAATCCACTCTTCACTTGGT 996 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || |||||| | |||||||| | ||||| | || ||||| | Sbjct 1472 ATGCAAATTTTCGTCAAAACACTTACCGGAAAGACTATCACTTTGGAGGTCGAGTCTTCT 1531 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| || ||| | || || ||||| ||| || || || ||||| || |||||||| Sbjct 1532 GATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 1591 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | | || |||||||||||||||| | | | | || || ||||| Sbjct 1592 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 1651 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||||||||| |||| || || Sbjct 1652 ATTCAAAAAGAATCCACTCTTCACTTGGT 1680 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || | || || ||| | || || | |||||||| | Sbjct 1016 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1075 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| ||| || | || || ||||| ||| || || || ||||| || |||||||| Sbjct 1076 GATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 1135 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | | || |||||||||||||||| | | | | || || ||||| Sbjct 1136 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 1195 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||||||||| |||| || || Sbjct 1196 ATTCAAAAAGAATCCACTCTTCACTTGGT 1224 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || | || || ||| | || || | |||||||| | Sbjct 1700 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1759 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| ||| || | || || ||||| ||| || || || ||||| || |||||||| Sbjct 1760 GATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 1819 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | | || |||||||||||||||| | | | | || || ||||| Sbjct 1820 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 1879 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||||||||| |||| || || Sbjct 1880 ATTCAAAAAGAATCCACTCTTCACTTGGT 1908 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || | || || ||| | || || | |||||||| | Sbjct 1928 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1987 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| ||| || | || || ||||| ||| || || || ||||| || |||||||| Sbjct 1988 GATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 2047 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | | || |||||||||||||||| | | | | || || ||||| Sbjct 2048 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 2107 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||||||||| |||| || || Sbjct 2108 ATTCAAAAAGAATCCACTCTTCACTTGGT 2136 >seq175 Length=1843 Score = 122 bits (134), Expect = 8e-23 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 25164 AATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAG 25223 ||||| | | ||||||| | |||||||| || | |||||||| | ||||| | |||| Sbjct 777 AATTATAAAGCATGCAAATCTTTGTAAAGACTCTTACCGGAAAGACTATCACTTTAGAAG 836 Query 25224 TCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283 ||||| | |||| || ||| | || || ||||| ||| || || || ||||| | Sbjct 837 TCGAATCTTCTGATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTC 896 Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCA 25343 | |||||||| ||| | | || | | || |||||||||||||||| | | | | | Sbjct 897 CTCCCGATCAACAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGA 956 Query 25344 GCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGT 25383 | || ||||| ||||||||||||||||| |||| || || Sbjct 957 GTGACTACAACATTCAAAAAGAATCCACTCTTCACTTGGT 996 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || |||||| | |||||||| | ||||| | || ||||| | Sbjct 1244 ATGCAAATTTTCGTCAAAACACTTACCGGAAAGACTATCACTTTGGAGGTCGAGTCTTCT 1303 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||| || ||| | || || ||||| ||| || || || ||||| || |||||||| Sbjct 1304 GATAGCATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 1363 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | | || |||||||||||||||| | | | | || || ||||| Sbjct 1364 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 1423 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||||||||| |||| || || Sbjct 1424 ATTCAAAAAGAATCCACTCTTCACTTGGT 1452 >seq3903 Length=141833 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 136663 GCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTTAAACCCTTCTCCCAGGAATAATTA 136722 || ||| ||| |||| ||||||||||||||||||||| || |||| ||| | ||| | Sbjct 12137 GCGGGTCTAGACCTCAAATAGTACATGCCCGTCTTTAATCCTTTCTTCCAAGCATAGAAA 12078 Query 136723 TGTATAGATGACAAAATTTTATAGCTCGGATCGGCCACGAAAAGATTTAGCGATTGGCTC 136782 || ||||| | ||| || | || || ||||| ||| | || | |||||| | Sbjct 12077 TGCATAGAAGTCAACTTTCCGAAACTAGGTTCGGCAGTGAATAAGTTCATCGATTGAGAC 12018 Query 136783 TGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTCAATAGTACTT-TTTGCTTAATTTC 136841 ||||| || || | || ||||| || ||||| |||||| | || ||||| |||||| Sbjct 12017 TGATCAATATAGGCACCACGGTCAGCTGCCAT-ATCAATAATGGTTCTTTGCGAAATTTC 11959 Query 136842 CCAAGCGGTTTTAAAGAGCTCCTTGA 136867 ||| | || || | | ||||||| Sbjct 11958 CCACACAGTCTTGTACAATTCCTTGA 11933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445072584810720