Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2672 120 2e-22 seq3880 114 1e-20 seq3789 95.1 1e-14 >seq2672 Length=76086 Score = 120 bits (132), Expect = 2e-22 Identities = 167/233 (72%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| |||||||| || | || |||||||| || || | ||| ||| || | Sbjct 17842 ATGCAAATCTTTGTTAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 17783 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | |||||| |||||| || || ||||| | || ||||| Sbjct 17782 GATACTATTGATAATGTGAAAAGCAAAATTCAAGATAAGGAAGGTATCCCACCAGATCAG 17723 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| || |||| ||| || |||||| | |||||| | ||| | | |||||||| Sbjct 17722 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACTTTAAGTGATTACAAT 17663 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGATAATG 106492 |||||||||||||| || || ||||| ||||| | ||| |||| ||| |||| Sbjct 17662 ATACAAAAAGAATCAACGCTTCATTTGGTATTACGTTTAAGAGGTGGA-AATG 17611 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | ||||| || || ||||| ||||| ||| | Sbjct 18070 ATGCAAATCTTTGTGAAGACTCTTACTGGTAAAACTATTACTTTGGAAGTTGAATCTTCT 18011 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | | || || ||||| || || |||||||| | || |||||| Sbjct 18010 GATAGTATTGACAACGTAAAGCAAAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAA 17951 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || || | ||| ||||||||||| |||||| || | | || || || Sbjct 17950 CAACGTCTCATCTTTGCAGGCAAACAATTGGAAGATGGCCGTACCCTTAGTGACTATAAT 17891 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || || ||| | ||| | || ||||||| || Sbjct 17890 ATTCAAAAAGAATCAACCCTTCATCTGGTACTAAGACTACGAGGTGG 17844 >seq3880 Length=130811 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || | || ||||| || || || | ||| ||| | | Sbjct 118626 ATGCAAATATTCGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCC 118685 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | |||||| |||||| ||||||||||| | || |||||| Sbjct 118686 GATACCATTGATAATGTGAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 118745 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| ||||| | ||| ||||||||| |||||||| | || | ||||||| || Sbjct 118746 CAAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAAT 118805 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 |||||||| ||||| ||||| ||||| ||||| | ||| |||| ||| Sbjct 118806 ATACAAAAGGAATCAACACTCCATTTGGTATTACGTTTAAGAGGTGGA 118853 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || || | ||||| || || || || | ||| ||| | Sbjct 118398 ATGCAAATTTTTGTCAAGACCCTTACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCT 118457 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | | | | || || ||||| ||| || || |||||| | || ||||||| Sbjct 118458 GATAGTATCGATAACGTAAAGCAAAAGATTCAAGATAAGGAAGGCATTCCTCCTGATCAA 118517 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || |||| ||| |||||||||||||| ||| | ||| | | || || || Sbjct 118518 CAACGTCTCATTTTTGCTGGCAAACAATTAGAGGATGGTCGTACTCTCAGTGACTATAAT 118577 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||| || || |||||||| | || |||||||| || Sbjct 118578 ATTCAAAAGGAATCAACTCTTCATTTAGTGCTAAGATTACGAGGTGG 118624 >seq3789 Length=135228 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 ||||||||||| |||||||||||| | ||||||||||| || || |||| ||| || Sbjct 104403 AAAATGCAAATCTTTGTTAAAACACTTACTGGCAAGACAATCACTTTGGAGGTCGAATCC 104462 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| | ||| | || || |||||||| ||||| ||||| | || |||| Sbjct 104463 TCTGATAGTATTGAGAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCTCCTGAT 104522 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||| | | || | ||| || || || | |||||| ||| || | || ||| Sbjct 104523 CAACAACGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACTTTGAGTGACTAC 104582 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGT 106468 ||||| ||||| ||||| || || || || || Sbjct 104583 AACATTCAAAAGGAATCCACTCTCCACTTGGT 104614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402310373799968