Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3810 113 6e-19 seq2394 107 3e-17 seq2703 104 3e-16 seq2705 98.7 1e-14 seq2503 93.3 6e-13 >seq3810 Length=142081 Score = 113 bits (124), Expect = 6e-19 Identities = 172/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||| | ||||| || ||||| || | | ||| Sbjct 84331 TACTCTTCTTACATCTACAAGGTCTTGAAGCAAGTTCACCCTGACACTGGT-----ATC- 84278 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| || |||||||| || | || || || | | Sbjct 84277 TCCAACAAGGCCATGTCTATCTTGAACTCCTTCGTCAACGATATCTTTGAACGTATTGCC 84218 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 | || ||| |||| || ||||||||| ||| ||| | || || ||| Sbjct 84217 TCTGAAGCCTCCAAGTTGGCCGCCTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 84158 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || |||||||| || || ||| | | ||| ||||| |||| |||||||||||| || || Sbjct 84157 CAAACCGCCGTTCGTCTCATCCTTCCCGGTGAACTCGCCAAGCACGCCGTCTCTGAAGGT 84098 Query 725139 ACCA 725142 |||| Sbjct 84097 ACCA 84094 >seq2394 Length=78826 Score = 107 bits (118), Expect = 3e-17 Identities = 172/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | |||||||||||| | ||||| || |||||| || ||| || | Sbjct 885 TACTCCTCTTATATCTACAAGGTCTTGAAGCAAGTTCACCCCGATAC---TGG--TAT-C 938 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| |||||||| || || | || || |||| | Sbjct 939 TCCAACAAGGCCATGTCCATCTTGAACTCCTTTGTCAATGATATCTTTGAACGTATCGCC 998 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 | || ||| |||| || ||||||||| ||| ||| | || || ||| Sbjct 999 TCTGAAGCCTCCAAGTTGGCTGCCTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 1058 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || ||||| || || || || | | || ||||| |||| ||||||||| || || || Sbjct 1059 CAAACCGCTGTTCGTCTTATTCTCCCTGGTGAACTCGCCAAGCACGCCGTTTCTGAAGGT 1118 Query 725139 ACCA 725142 |||| Sbjct 1119 ACCA 1122 >seq2703 Length=133504 Score = 104 bits (114), Expect = 3e-16 Identities = 171/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | |||||||||||| | ||||| || |||||| || ||| || | Sbjct 3208 TACTCCTCTTATATCTACAAGGTCTTGAAGCAAGTTCACCCCGATAC---TGG--TAT-C 3261 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| || ||||| || || | || || |||| | Sbjct 3262 TCCAACAAGGCCATGTCCATCTTGAACTCTTTCGTCAATGATATCTTTGAACGTATCGCC 3321 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 | || ||| |||| || ||||||||| ||| ||| | || || ||| Sbjct 3322 TCTGAAGCCTCCAAGTTGGCTGCCTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 3381 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || ||||| || || || || | | || ||||| |||| ||||||||| || || || Sbjct 3382 CAAACCGCTGTTCGTCTTATTCTCCCTGGTGAACTCGCCAAGCACGCCGTTTCTGAAGGT 3441 Query 725139 ACCA 725142 |||| Sbjct 3442 ACCA 3445 >seq2705 Length=35774 Score = 98.7 bits (108), Expect = 1e-14 Identities = 169/244 (69%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||| | ||||| || ||||| || | | ||| Sbjct 20840 TACTCTTCTTACATCTACAAGGTCTTGAAGCAAGTTCACCCTGATACTGGT-----ATC- 20787 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| ||||||| ||| ||||||| |||||||| || || | || || |||| | Sbjct 20786 TCTAACAAGGCCATGTCCATCTTGAACTCCTTTGTCAATGATATCTTTGAACGTATCGCC 20727 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 | || ||| |||| || ||||||||| ||| ||| | || || ||| Sbjct 20726 TCTGAAGCCTCCAAGTTGGCTGCCTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 20667 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || ||||| || || || || | | || ||||| |||| |||||||||||| || || Sbjct 20666 CAAACCGCTGTTCGTCTTATTCTTCCTGGTGAACTCGCCAAGCACGCCGTCTCTGAAGGT 20607 Query 725139 ACCA 725142 |||| Sbjct 20606 ACCA 20603 >seq2503 Length=34491 Score = 93.3 bits (102), Expect = 6e-13 Identities = 114/152 (75%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 1456172 CTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTT 1456230 |||||| || || || |||| ||||||||| ||||| |||||||| || || || || Sbjct 7282 CTTTGCTGAACGTCTGGTCGCCTTTGCCGCTGTCGAAGGCATCTTCTTTTCCGGTTCATT 7223 Query 1456231 CTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACG 1456290 | | ||||||||||| | ||||| || || | ||||||||| || || || || | Sbjct 7222 CGCCTCCATCTTTTGGTTAAAGAAACGTGGTTTGATGCCCGGT-TTGACGTTCAGTAATG 7164 Query 1456291 AATTTATCAGTCGCGACGAA-GTTTTCACCCC 1456321 |||| ||| |||| |||||| || ||||| || Sbjct 7163 AATTGATCTGTCGTGACGAAGGTCTTCACACC 7132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177433012343202