Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq3792 172 8e-38 >seq3792 Length=31585 Score = 172 bits (190), Expect = 8e-38 Identities = 479/726 (66%), Gaps = 14/726 (2%) Strand=Plus/Plus Query 161200 TCATGTGAAAGTATCTTTCGAGGAACCTGAATATACAGCACAGACTGATGCTCTGGGAAC 161259 |||||| ||||| ||||| || |||||||||| | | |||||||| || || Sbjct 15111 TCATGTCAAAGTTTCTTTTGACATGTCTGAATATACTGGTGACGTCGATGCTCTTGGCAC 15170 Query 161260 CCTAAGAGTATTGGAGGCAGTTCGT-CTCCTAGGTATGACAGATAGGGTCCGTATCTACC 161318 || | |||| || || | ||| || | ||| | | || | |||||| |||||| Sbjct 15171 ACTTCGTTTATTAGATGCTATCCGTACTTGT-GGTTTAGCTGACCGAGTCCGTTTCTACC 15229 Query 161319 AGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAACAACAC 161378 | || || ||| ||| | || || ||| ||||| || || || ||||| || | Sbjct 15230 AAGCCTCTACCTCTGAACTTTACGGTAAGGTCGTCGAGACTCCTCAAAAGGAAACCACGC 15289 Query 161379 CTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGAT---TGTAA 161435 | ||||| || || ||||| ||||| || || || |||||||| || ||||| ||||| Sbjct 15290 CCTTCTATCCTCGGTCTCCCTATGGTGTTGCCAAGCTCTATGGCTACTGGATCACTGTAA 15349 Query 161436 AGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTCAACCATGAGT 161495 | |||| | || || | ||| | || | | |||||| || |||||||| || | Sbjct 15350 A---CTACCGTGAATCCTACGACATGTATGCTTGCAATGGTATCCTTTTCAACCACGAAT 15406 Query 161496 CACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTATCCCGTATTA 161555 |||| || || ||| || || ||||||||||| || || | | | || |||| Sbjct 15407 CACCTCGTCGTGGTCGTACCTTTGTAACCCGTAAAATCACACGTGCTGTGGCCGATATTC 15466 Query 161556 GTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAACTCAAGACGAGATTGGGGTC 161615 ||| | ||||||||||| || || ||||| | | | | ||| |||||||| | Sbjct 15467 ACTTAGGCCGTCAGGATTGTCTTTATCTGGGTAACATTGATGCCAAACGTGATTGGGGAC 15526 Query 161616 ATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTGATGACT 161675 ||||| |||||||| |||| ||||||| | ||| | || || |||| ||| | || | Sbjct 15527 ATGCTCGTGACTATGTAGAGGGTATGTGGCTCATGCTTCAGCAAGAAAAGCCTCAAGATT 15586 Query 161676 ATGTGATTGCCACAGGTAAAGAGTATTCAGT--GAAGGACT-TTGTAGAGGCATCTGCTG 161732 || | ||||||||| || || | || |||| | ||| | |||||| | | Sbjct 15587 TCGTCCTGGCCACAGGTGAAACACATACTGTAAGAAGTTTTGTTGAAAAGGCAT-TCAAG 15645 Query 161733 AATACTTTGGTATGAAGATTGAGTGGCAGGGTGAAGGATTGGATGAAGTGGGTATAGATA 161792 ||| ||| | |||| ||| | |||||||| || |||| | |||| ||| Sbjct 15646 GTTAC--TGGACGTACTATTGTTTGGGAAGGTGAAGGTGTGAATGAGATTGGTAAAGACG 15703 Query 161793 GATTTACAAAGAAGGTTGTCGTTCGTGTGAGTGACAAATACTTCAGACCAGCAGAGGTTG 161852 ||| ||||| || || | | ||||||||| | || || || |||| Sbjct 15704 CTGAGACAGGTAAGGTGCGTGTGCGCATCGATCCCAAATACTTTCGTCCTGCCGAAGTTG 15763 Query 161853 AAACTCTCTGGGGTGATCCCACTAAGGCTAAAGAGGTATTGGGTTGGAAACCTAAGCATA 161912 | | | | ||||||||| || ||||| || | |||||| ||||||| |||| || Sbjct 15764 ATCTTTTGTTGGGTGATCCTACAAAGGCCAACACTGAATTGGGCTGGAAACGTAAGGTTA 15823 Query 161913 CCTTTG 161918 | |||| Sbjct 15824 CTTTTG 15829 Score = 87.8 bits (96), Expect = 3e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 160976 GGTATAACTGGGCAGGATGGATCCTATCTTGCTGAACTTCTACTGAAGAAGGGGTATGAA 161035 ||| | ||||| || || || || ||| | | |||| |||| || | || || |||||| Sbjct 14803 GGTGTCACTGGTCAAGACGGCTCTTATTTGGTTGAATTTCTGCTAGAAAAAGGATATGAA 14862 Query 161036 GTCCATGGTATTATTCGTAGAACCTCCTCGTTTAATACAGG 161076 || |||||||||||||||||| |||| || ||||||||||| Sbjct 14863 GTACATGGTATTATTCGTAGATCCTCTTCTTTTAATACAGG 14903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729893824325480