Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2503 86.0 8e-12 seq3792 82.4 9e-11 >seq2503 Length=34491 Score = 86.0 bits (94), Expect = 8e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 12070 TGGGGAACCTCAACGCCGAGAGGGACTGGGGACATGCCAAGGACTATGTTGAAGCCATGT 12129 |||| ||| | ||||| || | || ||||||||||| |||||||| || | ||||| Sbjct 3200 TGGGTAACATTGACGCCAAGCGTGATTGGGGACATGCGCGTGACTATGTAGAGGGCATGT 3259 Query 12130 GGCTCGTACTTCAACAAGAAGAGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACT 12189 ||||| | ||||| |||||| || | | || | |||| | || || || |||||||| Sbjct 3260 GGCTCATGCTTCAGCAAGAAAAGCCTCAAGATTTTGTCTTGGCTACCGGAGAGACACATA 3319 Query 12190 CCGTCAG 12196 ||||||| Sbjct 3320 CCGTCAG 3326 Score = 86.0 bits (94), Expect = 8e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| ||||| |||||||| |||| | |||||| ||| || ||| Sbjct 7123 GGCAAAATCGGTGTGAAGACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACC 7182 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| | ||| || ||||| ||||| || || | ||||| || || |||||||| Sbjct 7183 GGGCATCAAACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGAT 7242 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || || ||| || || || | ||||| ||||||||||| Sbjct 7243 GCCTTCGACAGCGGCAAAGGCGACCAGACGTTCAGCAAAGGA 7284 >seq3792 Length=31585 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATT-CGAGAAGCACAGACC 130074 ||||| ||| || ||||| |||||||| | || | |||||| | | ||| || ||| Sbjct 6828 GCAAAATCCGTATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGT-CAAACC 6886 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| | ||| || ||||| | ||| || || | |||||||||||| ||||| || Sbjct 6887 GGGCATCAAACCACGTTTCTTAAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATAT 6946 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || || || || || |||| |||||||||||||| || Sbjct 6947 ACCTTCTACTGCAGCAAAAGCAACAAGACGCTCAGCAAATGA 6988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618404888944760