Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq2423 116 3e-21 >seq2423 Length=40535 Score = 116 bits (128), Expect = 3e-21 Identities = 358/551 (65%), Gaps = 32/551 (6%) Strand=Plus/Minus Query 111593 GAGGTCTATAATTCTCCAATTCAAAGTCATCAGCAACA--AAATCGTCAATGCAAGCAAC 111650 |||| ||||||| ||||| |||| || ||| ||| ||||| || || | ||| Sbjct 23497 GAGGATTATAATTTTCCAACACAAAATCTTCA--AACTTGAAATCATCTATAGAGTCAAT 23440 Query 111651 TCTTCGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAA 111710 | | || || || ||||| |||| || | |||||| || || | || || || Sbjct 23439 TTTACGATTGATCCTTAGTGTTGGGAAAGACCTAGGCTCGCGTGTTACTTGCTGTTTCAA 23380 Query 111711 AGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGG 111770 | | | ||||| | |||||||| | ||| || ||| ||| || ||||| | ||| Sbjct 23379 TGCATCCAAGTGATCGATGTAAACATGTGTATCACCCATAGTATGTATAAATTCTCCAGG 23320 Query 111771 CTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAA 111830 |||||| || | ||||||||||||| || | || || |||||| ||||| Sbjct 23319 ATCCAAATTTGTTACGTGTGCAATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAAA 23260 Query 111831 TGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTT------ 111884 || ||||||| |||||||| | |||| ||||| ||| ||| |||||||| Sbjct 23259 AGGTACACCTAACCCCATATCGCAAGATCGCTGATAAAGCACACAAGATAGTTTAGCACG 23200 Query 111885 ------ATTT---------TGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAA 111929 || | | || |||||||| ||||||| ||||||||||||| || Sbjct 23199 TCCACCATCTGAAGGTGGGTTGGAAACATAAAACTGACAAAAAGCATGACAAGGAGGTAA 23140 Query 111930 TGCCATCCCATTCATA----AAGGGTCCCCATGCACACATGATCATCCTTCT-GCTGTAG 111984 ||||| | ||| ||| | ||| ||| | | || || | ||| |||| | Sbjct 23139 AGCCATAATAGGAATATCTGCAGGAT-TCCAGGCAGAGAGAATAATTCGTCTATCTGTTG 23081 Query 111985 CGATTATGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTATCCCTTTACCAGTATAA 112044 |||||| || |||| | ||| || | | | || || || |||| |||| |||| Sbjct 23080 -GATTATTTTTAATGGTATCTATCACTTGCTGTAATTGATCAATGCCTTGACCACTATAG 23022 Query 112045 TCCGCCTGACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTGGAATCCATAAATAGGC 112104 || | | || || ||| | |||||| |||||||||| ||||| ||||| | || Sbjct 23021 TCAGTATCGCAATCAACGTACTTGGCCCCAAAGTGTCTCCACTGGAACCCATAGACTGGA 22962 Query 112105 CCCAGATCTCC 112115 || ||||| || Sbjct 22961 CCAAGATCACC 22951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391926870022123