Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2543 131 1e-25 seq175 131 1e-25 seq3789 96.9 2e-15 seq3850 91.5 9e-14 seq2895 87.8 1e-12 >seq2543 Length=10996 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||||||||||||| || ||||| || || || |||||| Sbjct 1470 CCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAA 1411 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct 1410 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGG 1351 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||||||| |||||||| || | | ||| | || ||| ||| Sbjct 1350 ATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1291 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || |||||||| || | || || || ||||||||||| Sbjct 1290 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1244 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 ||||| | |||||| | ||||| || |||||| || ||||||||||| || || | Sbjct 2154 CCGCCACGAAGACGAAGGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 2095 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || | ||||| ||||||||||| ||||| || ||||| ||||| || || | Sbjct 2094 AAAGTA--CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAG 2037 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | || ||||||||| |||||||| || | | ||| | || ||| | Sbjct 2036 GAATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGA 1977 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| ||| || |||||||| || | || || || ||||||||||| Sbjct 1976 CTTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1928 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || || | |||||| | ||||| || |||||| || ||||||||||| || || | Sbjct 1242 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1183 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || | ||||| ||||||||||| ||||| || ||||| ||||| || || | Sbjct 1182 AAAGTA--CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAG 1125 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | || ||||||||| |||||||| || | | ||| | || ||| | Sbjct 1124 GAATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGA 1065 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| ||| || |||||||| || | || || || ||||||||||| Sbjct 1064 CTTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || || | |||||| | ||||| || |||||| || ||||||||||| || || | Sbjct 1926 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1867 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || | ||||| ||||||||||| ||||| || ||||| ||||| || || | Sbjct 1866 AAAGTA--CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAG 1809 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | || ||||||||| |||||||| || | | ||| | || ||| | Sbjct 1808 GAATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGA 1749 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| ||| || |||||||| || | || || || ||||||||||| Sbjct 1748 CTTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1700 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || || | |||||| | ||||| || |||||| || ||||||||||| || || | Sbjct 1698 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1639 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || | ||||| ||||||||||| ||||| || ||||| ||||| || || | Sbjct 1638 AAAGTA--CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAG 1581 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | || ||||||||| |||||||| || | ||| | || ||| | Sbjct 1580 GAATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGA 1521 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||| || || || || ||||| | ||||| || ||||| ||||| Sbjct 1520 CCTCCAAAGTGATAGTCTTTCCGGTAAGTGTTTTGACGAAAATTTGCAT 1472 Score = 91.5 bits (100), Expect = 9e-14 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || || | |||||| | ||||| || |||||| || ||||||||||| || || | Sbjct 1014 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 955 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || | ||||| ||||||||||| ||||| || ||||| ||||| || || | Sbjct 954 AAAGTA--CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAG 897 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628 | | || ||||||||| |||||||| || Sbjct 896 GAATACCTTCCTTGTCTTGAATCTTTTGCTT 866 >seq175 Length=1843 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||||||||||||| || ||||| || || || |||||| Sbjct 1242 CCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAA 1183 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct 1182 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGG 1123 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||||||| |||||||| || | | ||| | || ||| ||| Sbjct 1122 ATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1063 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || |||||||| || | || || || ||||||||||| Sbjct 1062 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||||||||||||| || ||||| || || || |||||| Sbjct 1698 CCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAA 1639 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct 1638 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGG 1579 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||||||| |||||||| || | | ||| | || ||| ||| Sbjct 1578 ATGCCTTCCTTGTCTTGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACT 1519 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || |||||||| || | || || || ||||||||||| Sbjct 1518 TCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1472 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || || | |||||| | ||||| || |||||| || ||||||||||| || || | Sbjct 1470 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 1411 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || | ||||| ||||||||||| ||||| || ||||| ||||| || || | Sbjct 1410 AAAGTA--CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAG 1353 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | || ||||||||| |||||||| || | ||| | || ||| | Sbjct 1352 GAATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGA 1293 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||| || || || || ||||| | ||||| || ||||| ||||| Sbjct 1292 CCTCCAAAGTGATAGTCTTTCCGGTAAGTGTTTTGACGAAAATTTGCAT 1244 Score = 91.5 bits (100), Expect = 9e-14 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || || | |||||| | ||||| || |||||| || ||||||||||| || || | Sbjct 1014 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTC 955 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || | ||||| ||||||||||| ||||| || ||||| ||||| || || | Sbjct 954 AAAGTA--CGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAG 897 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628 | | || ||||||||| |||||||| || Sbjct 896 GAATACCTTCCTTGTCTTGAATCTTTTGCTT 866 >seq3789 Length=135228 Score = 96.9 bits (106), Expect = 2e-15 Identities = 113/151 (75%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTG 34537 || || | |||||| | ||||| ||||||||| |||||||||||||| || | || Sbjct 104632 CCACCACGAAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCACTC 104573 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||| || || | |||||||| || ||||| ||||| || ||||| ||||| || || | Sbjct 104572 AAA--GTACGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAG 104515 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628 | | || ||||||||| ||| ||||| || Sbjct 104514 GAATACCTTCCTTGTCTTGGATTTTTTGCTT 104484 >seq3850 Length=152326 Score = 91.5 bits (100), Expect = 9e-14 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTG 34537 || || | |||||| | ||||| || || ||| |||||||||||||| || | || Sbjct 95249 CCACCACGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCGCTC 95308 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||| || || ||||||| | |||||||||||| || || | ||| |||||||| || | Sbjct 95309 AAA--GTACGACCGTCTTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGGTCAGGAG 95366 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628 | | || ||||||||| |||||||| || Sbjct 95367 GAATACCTTCCTTGTCTTGAATCTTTTGCTT 95397 >seq2895 Length=151278 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTG 34537 || || | |||||| | ||||| || |||||| |||||||||||||| || | || Sbjct 145895 CCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCACTC 145954 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || ||| || | ||||| | |||||||||||| || || | ||| ||||| || || | Sbjct 145955 AAGGTG--CGACCATCTTCCAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAG 146012 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628 | | || ||||||||| |||||||| || Sbjct 146013 GAATACCTTCCTTGTCTTGAATCTTTTGCTT 146043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314714559957593