Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2543 145 5e-30 seq3880 140 2e-28 seq2672 136 3e-27 seq3789 132 3e-26 seq175 120 2e-22 >seq2543 Length=10996 Score = 145 bits (160), Expect = 5e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || ||||| || || | ||||| || || | Sbjct 1016 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1075 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | |||||| | || ||||| ||| ||||| |||||| | || || |||||| Sbjct 1076 GATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 1135 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || ||||| || |||||||| ||||| | || ||||| | || |||||| Sbjct 1136 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 1195 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || |||||||| ||||| | || || ||| Sbjct 1196 ATTCAAAAAGAATCCACTCTTCACTTGGTT 1225 Score = 145 bits (160), Expect = 5e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || ||||| || || | ||||| || || | Sbjct 1700 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1759 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | |||||| | || ||||| ||| ||||| |||||| | || || |||||| Sbjct 1760 GATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 1819 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || ||||| || |||||||| ||||| | || ||||| | || |||||| Sbjct 1820 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 1879 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || |||||||| ||||| | || || ||| Sbjct 1880 ATTCAAAAAGAATCCACTCTTCACTTGGTT 1909 Score = 143 bits (158), Expect = 2e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || ||||| || || | ||||| || || | Sbjct 1928 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1987 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | |||||| | || ||||| ||| ||||| |||||| | || || |||||| Sbjct 1988 GATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAA 2047 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || ||||| || |||||||| ||||| | || ||||| | || |||||| Sbjct 2048 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTTTGAGTGACTACAAC 2107 Query 23791 ATACAAAAAGAGTCCAC 23807 || |||||||| ||||| Sbjct 2108 ATTCAAAAAGAATCCAC 2124 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || ||||| || || | ||||| || || | Sbjct 1244 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1303 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | |||||| | || ||||| ||| ||||| ||||| | || ||||| ||| Sbjct 1304 GATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCAA 1363 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || |||||| | ||||| | || || | || ||||| Sbjct 1364 CAGCGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAAT 1423 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || |||||||| ||||| | ||||| || Sbjct 1424 ATCCAAAAAGAATCCACTCTCCATTTGGT 1452 >seq3880 Length=130811 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || || || || ||||| ||||| | |||||||| || | Sbjct 118626 ATGCAAATATTCGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCC 118685 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | |||| |||| || |||||||||||| | || |||||||| Sbjct 118686 GATACCATTGATAATGTGAAAAGTAAAA-TTCAAGACAAAGAAGGTATTCCACCAGATCA 118744 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| ||||||||||| ||||| | || || ||| ||||||| || Sbjct 118745 ACAAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAA 118804 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||||||| || || ||| | ||||| || ||| | || |||| ||| Sbjct 118805 TATACAAAAGGAATCAACACTCCATTTGGTATTACGTTTAAGAGGTGGA 118853 >seq2672 Length=76086 Score = 136 bits (150), Expect = 3e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||| || || || || || || ||||| | |||||||| ||| | Sbjct 17842 ATGCAAATCTTTGTTAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 17783 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | |||| |||| || || || |||||| | || |||||||| Sbjct 17782 GATACTATTGATAATGTGAAAAGCAAAA-TTCAAGATAAGGAAGGTATCCCACCAGATCA 17724 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | |||| ||||| || |||||||| ||||| | || |||||| | |||||||| Sbjct 17723 GCAAAGACTAATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACTTTAAGTGATTACAA 17664 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||||||||||| || || | ||||| || ||| | || |||| ||| Sbjct 17663 TATACAAAAAGAATCAACGCTTCATTTGGTATTACGTTTAAGAGGTGGA 17615 Score = 116 bits (128), Expect = 3e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 23599 TAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAA 23658 || || |||| ||||| || || || || || || || || ||||| || ||| | ||| Sbjct 18082 TATTTTCTTATTATGCAAATCTTTGTGAAGACTCTTACTGGTAAAACTATTACTTTGGAA 18023 Query 23659 GTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTA 23718 ||||| || | || | | |||| | |||| ||||| || || ||||||||| | Sbjct 18022 GTTGAATCTTCTGATAGTATTGACAACGTAAAGCAAAAGATCCAAGATAAAGAAGGTATC 17963 Query 23719 CCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTA 23778 || ||||||||||| ||| | || ||||| ||||||||| ||||||| | || || | Sbjct 17962 CCACCAGATCAACAACGTCTCATCTTTGCAGGCAAACAATTGGAAGATGGCCGTACCCTT 17903 Query 23779 GGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | || || || || |||||||| || || | ||| | || |||| | ||||| || Sbjct 17902 AGTGACTATAATATTCAAAAAGAATCAACCCTTCATCTGGTACTAAGACTACGAGGTGG 17844 >seq3789 Length=135228 Score = 132 bits (146), Expect = 3e-26 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 23598 TTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657 ||| | |||||||||||| || || |||||||| || || || || || |||||| | || Sbjct 104393 TTATTCACTTAAAATGCAAATCTTTGTTAAAACACTTACTGGCAAGACAATCACTTTGGA 104452 Query 23658 AGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGT 23717 || || ||| | || | | |||| | | || |||||||| ||||| |||||| | Sbjct 104453 GGTCGAATCCTCTGATAGTATTGAGAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTAT 104512 Query 23718 ACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT 23777 || || |||||||| ||||| || ||||| || || || || ||||| | || ||||| Sbjct 104513 TCCTCCTGATCAACAACGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACTTT 104572 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTT 23820 | || |||||||| ||||| || ||||| | || || ||| Sbjct 104573 GAGTGACTACAACATTCAAAAGGAATCCACTCTCCACTTGGTT 104615 >seq175 Length=1843 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || ||||| || || | ||||| || || | Sbjct 1016 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1075 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | |||||| | || ||||| ||| ||||| ||||| | || ||||| ||| Sbjct 1076 GATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCAA 1135 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || |||||| | ||||| | || || | || ||||| Sbjct 1136 CAGCGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAAT 1195 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || |||||||| ||||| | ||||| || Sbjct 1196 ATCCAAAAAGAATCCACTCTCCATTTGGT 1224 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || ||||| || || | ||||| || || | Sbjct 1472 ATGCAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGAAGTCGAGTCTTCT 1531 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | |||||| | || ||||| ||| ||||| ||||| | || ||||| ||| Sbjct 1532 GATAGTATTGAAAACGTCAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGACCAA 1591 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || |||||| | ||||| | || || | || ||||| Sbjct 1592 CAGCGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAAT 1651 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || |||||||| ||||| | ||||| || Sbjct 1652 ATCCAAAAAGAATCCACTCTCCATTTGGT 1680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337993447471868