Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq3880 95.1 1e-14 seq2672 86.0 5e-12 >seq3880 Length=130811 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 101005 ACTATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTA 101064 |||||| || |||| || | ||| |||| || | |||||||| ||||| ||||| || Sbjct 118859 ACTATTTCCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATA 118800 Query 101065 ATCGGCCATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGG 101122 |||| | || | | || |||||| | ||||||||| ||| | ||||| |||||||| Sbjct 118799 ATCG--CTTAATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGA 118742 Query 101123 TCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACAT 101165 ||| || | ||||||||||| |||||| |||||||| Sbjct 118741 TCTGGTGGAATACCTTCTTTGTCTTGAATTTTACTTTTCACAT 118699 >seq2672 Length=76086 Score = 86.0 bits (94), Expect = 5e-12 Identities = 163/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||| | ||||| |||| || | |||||||||||||||||||| || || Sbjct 17844 CCACCTCGTAGTCTTAGTACCAGATGAAGGGTTGATTCTTTTTGAATATTATAGTCACTA 17903 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | || | |||||||||||||||||| ||| | || || | |||||| ||| || Sbjct 17904 AGGGTACGGCCATCTTCCAATTGTTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGG 17963 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | |||||||| || || ||||| || || | | | | | || | || | Sbjct 17964 ATACCTTCTTTATCTTGGATCTTTTGCTTTACGTTGTCAATACTATCAGAAGATTCAACT 18023 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAATATAT 101251 || | ||||||||||| || || | || || | ||| |||||||| || | || |||| Sbjct 18024 TCCAAAGTAATAGTTTTACCAGTAAGAGTCTTCACAAAGATTTGCATAATAAGAAAATAT 18083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409641223462539