Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3799 316 3e-81 seq3792 176 6e-39 seq2503 141 1e-28 >seq3799 Length=82858 Score = 316 bits (350), Expect = 3e-81 Identities = 653/960 (68%), Gaps = 20/960 (2%) Strand=Plus/Minus Query 77676 AAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATC 77735 ||||| ||||| || | |||||||| || || |||| | | | | ||||| | || Sbjct 43804 AAAGCGATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGGCTTGTATATTCGACAATT 43745 Query 77736 TCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTG 77795 || ||||| || ||||||||||| || || |||| |||||||||||||||||| |||| Sbjct 43744 TCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGTTGGTTGCTCTTTCTATTA 43685 Query 77796 CATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGAT 77855 || | ||||| || || |||||||| | ||||||||| | |||| ||| | |||| Sbjct 43684 CAAGCATCCTTGTAGAGCATAAACGGGTTACCGGTTTCAGTTTGTGCTTCCAAGATAGCA 43625 Query 77856 TTCCAGACGACTCTAG--CTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATA--TTG 77911 | ||| | ||| | | | || || | | | || | || | |||||| || Sbjct 43624 TACCATA--ACTTTTGTGCCTTAATTGTCTCTCTCGCTCTTCCTTCGCGTTCATAGCTTT 43567 Query 77912 AGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGG 77971 || | ||| | |||| ||||| ||||||||||| | ||| ||||| |||||| || Sbjct 43566 CATAAAGAGC--TACAAACTCATCACCCCAAACATCTTGCAAACCAGGTGCTTCATTAGG 43509 Query 77972 GCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCA 78031 || | | ||||| || ||| | ||||| || |||| ||| |||||||| |||| ||| Sbjct 43508 ACAAAAGAGAGACCAATCCCCACCGTCCTTGACACGTTGCATGAAGAGATCGGGTACCCA 43449 Query 78032 TAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATC 78091 || ||| ||| | ||| |||| ||| ||| || || || |||||| | | ||| Sbjct 43448 AAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGTTCTTTCTTAAATC 43389 Query 78092 GAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCG 78151 | ||| | ||||| | ||||||||| || ||||| || || | |||| || || Sbjct 43388 TAAAAAGGTAAAGATATCCGCATGCCATGGCTCAAGATACATGGCGAAGGCTCCCGGACG 43329 Query 78152 TTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAAT 78211 || || || || ||||| | ||| | || |||||||| | || | || ||| |||| Sbjct 43328 CTTGTTGCCACCTTGATCGACATAACGTGCTGTGTTATTGAACACACGCAGCATGGGAAG 43269 Query 78212 AATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACT 78271 | ||| || || |||||||| || | |||||| |||| | || |||||||| Sbjct 43268 CAAACCATTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGGCACGAATATTGTG 43209 Query 78272 AATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATC 78331 |||| | || || || ||||| | || || ||| | || || ||| ||||| || Sbjct 43208 AATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGATTTTTAATGTTTC 43149 Query 78332 GTAGATACCCTCTATACTGTCATCCATCATGTTAAG-AAGAA--AACAGCTAGACATTTG 78388 ||||| || || || || ||| ||||| | || ||||| || || ||||| || Sbjct 43148 ATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAG---GACATCTG 43092 Query 78389 ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA 78448 | || || || || ||||| || || || ||| ||||| ||||| |||| ||||| Sbjct 43091 AGGACGAGGTGTACCGGCATTGAACAAAGTGGGACTGGCATGAGTAAAGAATTTCTCAGA 43032 Query 78449 AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTA 78507 | | ||||| || ||||| || | || || || || | || || || | || | Sbjct 43031 CATCAAGTTGTAAGTCTCAATTGCAGCGTCAATATCTTCACCG-TGGATACCAATAGCGA 42973 Query 78508 CACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATG 78567 ||||||| | | ||| ||||| | || | ||||| | || || | | || | Sbjct 42972 CACGCATGATAAGATGTTGAGGACGCTCGGCAGTCTTGCCGTCAATCTTGAGTAGATAGG 42913 Query 78568 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAAT 78625 || ||| | ||| || || |||||| ||||||| ||||| ||||| || |||||||| Sbjct 42912 ATCGTTCGAGAGTCTTGAATCCAAAAAAGTTGTACTTGAAA--TCTCTGTCATAAATAAT 42855 Score = 185 bits (204), Expect = 1e-41 Identities = 530/810 (65%), Gaps = 19/810 (2%) Strand=Plus/Minus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 |||||| | ||| |||||||| || || | ||| ||| || || || ||||| || Sbjct 44733 TGTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAGCCATAAAAGTGCATACT 44674 Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930 |||||| || | | | || || || ||| || |||| ||||||||||| || Sbjct 44673 TGTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAAT 44614 Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990 | | || || | ||||| ||||| | | ||| || |||| |||||||| | ||| Sbjct 44613 GTAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGCTGAGAGATTTCCCAGACAGT 44554 Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGT------ATTTTGAATGGAACCACC 77044 ||| | | || ||||| | | || || |||| |||||| | || ||||| Sbjct 44553 CTTGTAGAGTTCTTTGAGGTGTT---GAGGGATTGTGGGTACATTTTGGACAGACCCACC 44497 Query 77045 ATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCC-TCTCTGTTAAAACTC 77103 ||| | || || | ||||| | ||||| ||||| ||| || | || ||| | | Sbjct 44496 ATCGGCCATGATCATGTTCTTGACTTCATCGTTCCA-AATACCCATATCAACCAAATCAC 44438 Query 77104 TAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATAT 77163 ||| | ||| || || |||||| |||| || || | || | ||| || |||| | Sbjct 44437 GAAGTAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGT 44378 Query 77164 TACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTG 77223 || || || || || | | | |||||| ||||| ||||||| ||||| || || | Sbjct 44377 TAGAAGTGTAAGGCTCAAAACACTCATTGAAACCCAACATTTGAGAGGTAGAGGCGGTAG 44318 Query 77224 GCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGAT 77283 ||||||| || | ||| | ||| | | || || | || || || ||||| Sbjct 44317 GCATAGGGGCTAACAAAAGTGAATTGCGAACGCCGTGCTTGGCTATCTTTTCCTTTAGTG 44258 Query 77284 ATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGT 77343 | ||| ||||||||| | ||| |||| ||| | |||||||||| || || | Sbjct 44257 AAGCCCAGTCCCAAAGAGAGGTGGGTGTCACATTCCACATGTCGTATTGTAAGATGCCCT 44198 Query 77344 TACTAGCATAT--GAT--CCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCA 77399 | | ||| || || | ||| |||||||||||||| | |||| || | ||| Sbjct 44197 T----GGATACAGGACTACCTTCATAAGTTTCATAAGGTCCGTACTTTTCGGCCAATTCG 44142 Query 77400 CAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT 77459 || ||||||||||| | | ||| || ||||| || || | |||| | | || Sbjct 44141 CATGAGGCTTCCAATGCAGCATGATAGATAGTTTCAAAGATTTGAATATTTAATTGTTTG 44082 Query 77460 GCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACT 77519 |||||| | ||||| || ||| |||| || || | |||||||| || || || Sbjct 44081 GCTTCAGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCTGCTAAACCTTGGACA 44022 Query 77520 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAA 77579 || | ||| ||||| | ||||||||| || || ||| ||||| | ||| ||||| Sbjct 44021 CCTAAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAG 43962 Query 77580 TTAATGTCTATAATTTTATTGAGATTTCTA 77609 || || || ||||| || || | |||||| Sbjct 43961 TTGATATCAATAATCTTGTTCAAGTTTCTA 43932 >seq3792 Length=31585 Score = 176 bits (194), Expect = 6e-39 Identities = 300/433 (69%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 47853 TGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 47912 ||||| ||| ||||| || || ||||| || || || |||| || ||| || | ||| Sbjct 6537 TGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTTGCAGTGAAATCATGTCC 6596 Query 47913 ATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGT 47972 ||||| ||||| ||||| ||| |||||||||| | || || | | || || Sbjct 6597 ATAAAGTCAAACGGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAGA 6656 Query 47973 CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 48032 | ||| ||||| ||||| || ||| ||||| | ||||||| || || | | | Sbjct 6657 CGATCAGCAACAAATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGCA 6716 Query 48033 ACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGAT 48092 || |||| || || || | || || ||||| ||| ||||| |||| ||| || Sbjct 6717 ACAGGTAATGCATCAGTTAAGAATTCCTGTTCAATACCTACAGCTTCCATTATAATATCC 6776 Query 48093 GTTACCGTTTCCTCACTTGGTGGATACAACAAATGTT--TAAACATTAAACATGCAAAAT 48150 | || || | || ||| | | || ||||| |||||| | ||| ||||||| Sbjct 6777 TTCACACGTTGTTGGCTAGGTTGTTT--ACGAATGTGAGTAAACAAAAGACAAGCAAAAT 6834 Query 48151 CACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTA 48210 | |||||||||||| || | || ||| ||||| ||| ||| || | ||||||||| | Sbjct 6835 CCGTATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCA 6894 Query 48211 GTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 48270 |||||||| || |||||||| || | || || || |||||||||||||| ||||||| Sbjct 6895 AACCACGTTTCTTAAGCCAAAAGATAGAGGCAAATGAGCCAGAAAAGAATATACCTTCTA 6954 Query 48271 CGGCCGCAAATGC 48283 | || ||||| || Sbjct 6955 CTGCAGCAAAAGC 6967 Score = 150 bits (166), Expect = 2e-31 Identities = 229/323 (71%), Gaps = 5/323 (2%) Strand=Plus/Plus Query 48361 TTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTA 48420 |||| || |||||| || || | | |||||| | |||||| | || ||||| | Sbjct 7103 TTGTATCAATAGCAGAGAAAAGCATTTCTTTTTCTTCATCATCTTTTATATAGGTATCAA 7162 Query 48421 TTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAAC 48480 | |||||||| || |||| ||||| ||||||||||| || ||||| || ||||||| Sbjct 7163 TCAAAAGACTGTATGTTTCAGAGTGGATATTTTCAATCATGATTTGAAAGCCATAAAAAC 7222 Query 48481 ATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTA 48540 || | ||||| | || | || || |||||| || ||||||| |||||||| | Sbjct 7223 ATTTAGCTTCAGGAATTTTGACTTCATCACAAAAATTTTGCACCAAATTTTCATTTACAA 7282 Query 48541 TTCCATCACTAGC-AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAA 48599 | |||||| ||| ||||| || || || ||| | ||||||| || || || | Sbjct 7283 TACCATCA-GAGCTCGCAAAGAAAGCCAAAACACGAGAAATAAAAAATCGCTCATTCTCA 7341 Query 48600 GTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656 |||| ||| || ||| ||||| ||| | || ||||| |||||||||||||||| Sbjct 7342 GTCATTTTGTTTTCCCAATCATTTTGGTCTCTACTTAAATCTATTTCTTCAGCTGTCCAA 7401 Query 48657 AATGATGCCTCTGCTTTTTTATA 48679 || ||||| ||||| || ||||| Sbjct 7402 AAAGATGCTTCTGCCTTCTTATA 7424 >seq2503 Length=34491 Score = 141 bits (156), Expect = 1e-28 Identities = 291/433 (67%), Gaps = 0/433 (0%) Strand=Plus/Plus Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 |||||| ||| ||||| || || ||||| || || ||||||| | || || | || Sbjct 6832 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 6891 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971 |||||| || ||||| ||| ||||| ||||| || | ||| || | | || || Sbjct 6892 CATAAAGTCGAATGGGTTAGAGGCATTGTAAATCTTGTCAAAGCCAAGGGCGACCATGAG 6951 Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031 | ||| || |||||||| || || ||||| | ||||| || || | | Sbjct 6952 ACGATCAGCGACGAATTCAATGTACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 7011 Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGA 48091 || || ||||| |||| || || |||||||||||| ||| || || || || || Sbjct 7012 CACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACTGCTTCTACAATAATGTC 7071 Query 48092 TGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATC 48151 | || || | ||| ||| | | | || | |||| | ||| |||||||| Sbjct 7072 CTTGACGCGTTGTTGACTGGGTTGTTTGCGGATGTGGGTGAACAAGAGACAGGCAAAATC 7131 Query 48152 ACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAG 48211 ||||||||||| || | || || ||||| ||| || || | ||||||||| | Sbjct 7132 GGTGTGAAGACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGCATCAA 7191 Query 48212 TCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 48271 |||||||| || | |||||| || | ||||| || || |||||||| |||||||| || Sbjct 7192 ACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCTTCGAC 7251 Query 48272 GGCCGCAAATGCG 48284 || ||||| ||| Sbjct 7252 AGCGGCAAAGGCG 7264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694634752545440