Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2543 131 4e-25 seq175 131 4e-25 seq2672 109 1e-18 seq3880 107 4e-18 seq3799 86.0 1e-11 >seq2543 Length=10996 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| ||||| || ||||||||||| ||||| || | | || | |||||| Sbjct 1455 AGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCT 1396 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| || || || || || | ||| ||||| | | ||| |||||||| ||| Sbjct 1395 TCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCT 1336 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||||| ||||| | || | || || ||| ||| ||||| | ||||| ||| Sbjct 1335 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1276 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| | |||||| Sbjct 1275 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1244 >seq175 Length=1843 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| ||||| || ||||||||||| ||||| || | | || | |||||| Sbjct 1227 AGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCT 1168 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| || || || || || | ||| ||||| | | ||| |||||||| ||| Sbjct 1167 TCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCT 1108 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||||| ||||| | || | || || ||| ||| ||||| | ||||| ||| Sbjct 1107 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1048 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| | |||||| Sbjct 1047 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| ||||| || ||||||||||| ||||| || | | || | |||||| Sbjct 1683 AGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAAAGGGTACGGCCATCT 1624 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| || || || || || | ||| ||||| | | ||| |||||||| ||| Sbjct 1623 TCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCT 1564 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||||| ||||| | || | || || ||| ||| ||||| | ||||| ||| Sbjct 1563 TGAATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTT 1504 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| | |||||| Sbjct 1503 TTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1472 >seq2672 Length=76086 Score = 109 bits (120), Expect = 1e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT-CT 151945 ||||| || || |||||||| || || |||||||| || || || || |||| | | | Sbjct 17853 AGTCTTAGTACCAGATGAAGGGTTGATTCTTTTTGAATATTATAGTCA-CTAAGGGTACG 17911 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| | ||| || || ||||| || | || || || | | ||| ||||| Sbjct 17912 GCCATCTTCCAATTGTTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGGATACCTTC 17971 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || ||||| || ||||| || || | || | || || ||| || ||||| | ||| Sbjct 17972 TTTATCTTGGATCTTTTGCTTTACGTTGTCAATACTATCAGAAGATTCAACTTCCAAAGT 18031 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||| || || ||||||||||| |||| ||||| Sbjct 18032 AATAGTTTTACCAGTAAGAGTCTTCACAAAGATTTGCAT 18070 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 |||||| || || |||||||| || |||||||| |||||| | |||||||| || Sbjct 17639 ATGAAGCGTTGATTCTTTTTGTATATTGTAATCACTTAAAGTACGACCATCTTCAAGTTG 17698 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || || || || ||||| || | | ||| |||||||| ||||||||||| Sbjct 17699 TTTACCAGCAAAAATTAGTCTTTGCTGATCTGGTGGGATACCTTCCTTATCTTGAATTTT 17758 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | || | | || || || ||||| | || || || ||||| || Sbjct 17759 GCTTTTCACATTATCAATAGTATCGGAGGATTCAACTTCTAATGTGATTGTCTTGCCTGT 17818 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || |||| ||||| Sbjct 17819 AAGAGTCTTAACAAAGATTTGCAT 17842 >seq3880 Length=130811 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || || || || ||||| || || |||||| ||| || | ||||||||||| Sbjct 118829 ATGGAGTGTTGATTCCTTTTGTATATTATAATCGCTTAATGTACGACCATCTTCTAGTTG 118770 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || |||||||| || || || || | | || ||||| || ||||||||||| Sbjct 118769 TTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGAATTTT 118710 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | || | | | || ||| || ||||| | || || |||||||| || Sbjct 118709 ACTTTTCACATTATCAATGGTATCGGAAGATTCAACTTCTAATGTGATTGTTTTGCCTGT 118650 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| ||||| | ||||| Sbjct 118649 AAGAGTCTTGACGAATATTTGCAT 118626 >seq3799 Length=82858 Score = 86.0 bits (94), Expect = 1e-11 Identities = 189/281 (67%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGG-CAAACGGAATGTG 115687 || |||||| ||||| | | ||||| || ||| | || ||||||| | || || || Sbjct 43437 TTTTATGCCCTTTGGGTACCCGATCTCTTCATGCAACGTGTCAAGGACGGTGGGGAT-TG 43495 Query 115688 GAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGA 115747 | ||||||||||| |||||||| |||||| | | ||||||| ||| ||||||| Sbjct 43496 GTCTCTCTTTTGTCCTAATGAAGCACCTGGTTTGCAAGATGTTTGGGGTGATGAGTTTGT 43555 Query 115748 GAATCTTTACGAAAGGTACGAGAAAGAGGGAAGAGCCAAAAGGGTTGTGAAGGCGCAAGA 115807 |||||| ||||| || || || |||||||| | | | | ||||| ||| | Sbjct 43556 AGCTCTTTATGAAAGCTATGAACGCGAAGGAAGAGCGAGAGAGACAATTAAGGCACAAAA 43615 Query 115808 CCTTTGGCATCATATCCTTGTCACACAGTCAGAGGTCGGAATGCCCTTTATTGCGTACAA 115867 | ||| || |||| | | |||| | || ||| | || ||||| ||||| Sbjct 43616 GTTATGGTATGCTATCTTGGAAGCACAAACTGAAACCGGTAACCCGTTTATGCTCTACAA 43675 Query 115868 AGATGCAGTTTGTCGAAAGAGCAATCAAAAGAATTTCGGTA 115908 ||||| | | |||||||||| ||| | || || |||| Sbjct 43676 GGATGCTTGTAATAGAAAGAGCAACCAACAAAACTTGGGTA 43716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153762834566991