Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3792 185 9e-42 seq2503 118 1e-21 >seq3792 Length=31585 Score = 185 bits (204), Expect = 9e-42 Identities = 391/582 (67%), Gaps = 40/582 (7%) Strand=Plus/Plus Query 23153 TCATTTTTTAAAAATCTTCATCTAAAGTGAATTTCACTGCTTTATCACTA---------T 23203 || ||||||||||||| |||| ||||||||||| ||| ||| | | Sbjct 6466 TCTTTTTTTAAAAATCAGCATCCAAAGTGAATTT------TTTCTCAACAGGGGTCTTGT 6519 Query 23204 TCATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCT 23263 |||| ||||| ||||| || |||||| |||| ||||| || ||||| || | Sbjct 6520 TCATGACACCAGCACGCTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTCCCTT 6579 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTA---- 23319 | ||| || | |||||||| ||||| ||||| | | |||| | |||| Sbjct 6580 GCAGTGAAATCATGTCCATAAAGTCAAACGGATTCGTTGCCATATAAAT---TTTATCGA 6636 Query 23320 ---CATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAA 23376 || || | | | ||| | ||| || ||||||||||| ||||||||||||||| Sbjct 6637 ACCCAAGAGCAACCAT----AAGACGATCAGCAACAAATTCAATGTATTGACACATCAAA 6692 Query 23377 TCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATG 23436 | | || ||||| || | | || || | |||||| ||||||| | |||||| Sbjct 6693 GTAGAATTCATACCAATCAATGCAACAGGTAATGCATCAGTTAAGAATTCCTGTTCAATA 6752 Query 23437 GAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTA--AAT 23494 ||||| || | || || | | | || || |||||| | |||| ||| Sbjct 6753 CCTACAGCTTCCATTATAATATCCTTCACACGTTGTTGGCTAGGTTG----TTTACGAAT 6808 Query 23495 ACT--TAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTC 23552 ||||||| | ||| |||||||| ||| || ||||| || | || ||||||||| Sbjct 6809 GTGAGTAAACAAAAGACAAGCAAAATCCGTATGAAGACCTTCGTCACGACAAATCAATTC 6868 Query 23553 ATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA 23612 |||| ||| || || || ||||| || || ||||| |||| |||||| || | ||||| Sbjct 6869 ATTACTAAAAGTCAAACCGGGCATCAAACCACGTTTCTTAAGCCAAAAGATAGAGGCAAA 6928 Query 23613 TGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGT 23672 ||| || |||||||| ||||| || || || ||||| || |||||||| | |||| Sbjct 6929 TGAGCCAGAAAAGAATATACCTTCTACTGCAGCAAAAGCAACAAGACGCTCAGCAAA--- 6985 Query 23673 TGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTT 23714 || || || | ||||||||||||| | ||| | |||||| Sbjct 6986 TGAATCATTAGCAGAAATCCATTTGAAAGCCCAGTCAGCCTT 7027 Score = 163 bits (180), Expect = 3e-35 Identities = 242/340 (71%), Gaps = 15/340 (4%) Strand=Plus/Plus Query 23732 TTGTTTCAATTGCTTTTAAGAGAAAAGT-----TTTTTCTTCATTATCTGTTATATATGT 23786 |||| ||||| || ||||||||| ||||||||||| |||| ||||||| || Sbjct 7103 TTGTATCAATAGC-----AGAGAAAAGCATTTCTTTTTCTTCATCATCTTTTATATAGGT 7157 Query 23787 ATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATA 23846 |||||| | | ||| || ||||||| || ||||||||||| || ||||| ||||| Sbjct 7158 ATCAATCAAAAGACTGTATGTTTCAGAGTGGATATTTTCAATCATGATTTGAAAGCCATA 7217 Query 23847 AAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTT 23906 ||||||| ||||||||| | || || |||| | |||| ||| | |||||||| || Sbjct 7218 AAAACATTTAGCTTCAGGAATTTTGACTTCATCACAAAAATTTTGCACCAAATTTTCATT 7277 Query 23907 AACAATACCATCACTAGC-AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA- 23964 |||||||||||| ||| ||||||||||| | |||| |||||| || ||| Sbjct 7278 TACAATACCATCA-GAGCTCGCAAAGAAAGCCAAAACACGAGAAATAAAAAATCGCTCAT 7336 Query 23965 --TCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTG 24022 ||||| | |||| ||||||||| ||| | |||||| | ||| ||| ||| Sbjct 7337 TCTCAGTCATTTTGTTTTCCCAATCATTTTGGTCTCTACTTAAATCTATTTCTTCAGCTG 7396 Query 24023 TCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAAT 24062 |||||||| ||| || |||||| | | ||||||| Sbjct 7397 TCCAAAAAGATGCTTCTGCCTTCTTATAGAATTGCCAAAT 7436 >seq2503 Length=34491 Score = 118 bits (130), Expect = 1e-21 Identities = 302/455 (66%), Gaps = 10/455 (2%) Strand=Plus/Plus Query 23220 TTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTC 23279 |||||| || |||||| |||| ||||| || ||||| || | | || || | || Sbjct 6832 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 6891 Query 23280 CATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACAT-GATAATTCCTTTAAA- 23337 |||||| || ||||| ||||| | ||| || | ||| || | || | | Sbjct 6892 CATAAAGTCGAATGGGTTAGAGGCATTGTAAAT--CTTGTCAAAGCCAAGGGCGACCATG 6949 Query 23338 AGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGT 23397 || | ||| || || |||||||| || ||||||||||| | ||| ||||| || | | Sbjct 6950 AGACGATCAGCGACGAATTCAATGTACTGACACATCAAGGTAGCGTTCATACCGATCAAT 7009 Query 23398 TTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT 23457 || || | ||||| | | |||| || ||| || || || ||| ||| || Sbjct 7010 GCCACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACTGCTTCTACAATAATG 7069 Query 23458 TGAACAATAAC---TTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCA 23514 | | | || || || ||| ||| | | | | | ||||| | ||| ||| Sbjct 7070 T---CCTTGACGCGTTGTTGACTGGGTTGTTTGCGGATGTGGGTGAACAAGAGACAGGCA 7126 Query 23515 AAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGC 23574 ||||| || || ||||| || | || |||||||||||| || || || || ||| Sbjct 7127 AAATCGGTGTGAAGACCTTCGTCACGACAGATCAATTCATTACTGAACGTCAAACCGGGC 7186 Query 23575 ATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCC 23634 || || || ||||| || | |||||| || | || ||||| ||||||||||| || || Sbjct 7187 ATCAAACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAACCGGAAAAGAAGATGCCT 7246 Query 23635 TCAACAGCCGCAAAGGCCACAAGACGTGTACCAAA 23669 || ||||| |||||||| || |||||| | |||| Sbjct 7247 TCGACAGCGGCAAAGGCGACCAGACGTTCAGCAAA 7281 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/181 (71%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 ||||||| |||||| | || || |||||||| | | ||| || |||||| ||| || Sbjct 7418 TTTTCTTGGTTATCTTTAATGTAGGTATCAATCAAGAGACTGTAAGTTTCAGCATGGATG 7477 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 |||||||| ||||| || ||||||||||| | ||||| | | | || |||| | Sbjct 7478 TTTTCAATCATGATCTGGAAACCATAAAAACACTTGGCTTCGGGAATCTTGACTTCATCA 7537 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAG-CAAG 23939 |||| ||| | || ||||| || || |||||||| |||||||||| | |||| Sbjct 7538 CAAAAGTTTTGTACCAAGTTTTCATTCACGATACCATCTGAGCCAGCAAAGAAGGCCAAG 7597 Query 23940 A 23940 | Sbjct 7598 A 7598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521462440569400