Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3789 102 6e-17 seq2543 100 2e-16 seq175 100 2e-16 seq2672 86.0 5e-12 >seq3789 Length=135228 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||||| |||||||| || | || | || || Sbjct 104614 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCA 104555 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||||||| || ||||| | ||| | ||||||||| || Sbjct 104554 AGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGG 104495 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || ||||| | | | || | || | |||||| ||||||| || || ||||| Sbjct 104494 ATTTTTTGCTTGACATTCTCAATACTATCAGAGGATTCGACCTCCAAAGTGATTGTCTTG 104435 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || || ||||||||||| Sbjct 104434 CCAGTAAGTGTTTTAACAAAGATTTGCAT 104406 >seq2543 Length=10996 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| || ||||| |||||||| || | || | || || Sbjct 996 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 937 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || |||||||||||||| || ||||| | ||| | ||||||||| || Sbjct 936 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 877 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | ||| | || | ||||| || || | || || |||||| Sbjct 876 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTCTTT 817 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || ||||| || |||||||||||| Sbjct 816 CCGGTAAGAGTCTTTACAAAGATTTGCATG 787 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| || ||||| |||||||| || | || | || || Sbjct 1224 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1165 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || |||||||||||||| || ||||| | ||| | ||||||||| || Sbjct 1164 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1105 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | || | || | || | || || || |||| ||||| || || Sbjct 1104 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1045 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| ||||| || ||||| Sbjct 1044 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| || ||||| |||||||| || | || | || || Sbjct 1680 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1621 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || |||||||||||||| || ||||| | ||| | ||||||||| || Sbjct 1620 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1561 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | ||| | || | || || ||||||| || || |||||| Sbjct 1560 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAAGTGATAGTCTTT 1501 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || ||||| |||||||| Sbjct 1500 CCGGTAAGTGTTTTGACGAAAATTTGCAT 1472 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| || ||||| |||||||| || | || | || || Sbjct 1908 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1849 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || |||||||||||||| || ||||| | ||| | ||||||||| || Sbjct 1848 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1789 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | || | || | || | || || || |||| ||||| || || Sbjct 1788 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1729 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| ||||| || ||||| Sbjct 1728 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1700 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| || ||||| |||||||| || | || | || || Sbjct 2136 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 2077 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || |||||||||||||| || ||||| | ||| | ||||||||| || Sbjct 2076 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 2017 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | || | || | || | || || || |||| ||||| || || Sbjct 2016 ATCTTTTGCTTGACGTTTTCAATACTATCAGAAGACTCGACTTCCAAGGTAATGGTTTTA 1957 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| ||||| || ||||| Sbjct 1956 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1928 >seq175 Length=1843 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| || ||||| |||||||| || | || | || || Sbjct 996 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 937 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || |||||||||||||| || ||||| | ||| | ||||||||| || Sbjct 936 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 877 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | ||| | || | ||||| || || | || || |||||| Sbjct 876 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTCTTT 817 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || ||||| || |||||||||||| Sbjct 816 CCGGTAAGAGTCTTTACAAAGATTTGCATG 787 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| || ||||| |||||||| || | || | || || Sbjct 1452 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCACTCAAAGTACGGCCATCTTCG 1393 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || |||||||||||||| || ||||| | ||| | ||||||||| || Sbjct 1392 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGA 1333 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | ||| | || | || || ||||||| || || |||||| Sbjct 1332 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAAGTGATAGTCTTT 1273 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || ||||| |||||||| Sbjct 1272 CCGGTAAGTGTTTTGACGAAAATTTGCAT 1244 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 44195 TTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTC 44254 || || |||||||||||||| || ||||| | ||| | ||||||||| || ||||| Sbjct 1842 TTACCAGCAAAGATCAAACGTTGTTGATCGGGAGGAATACCTTCCTTGTCTTGAATCTTT 1783 Query 44255 TGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTG 44314 ||||| | | | ||| | || | || || ||||||| || || |||||||| || Sbjct 1782 TGCTTGACATTCTCAATGCTATCAGAAGACTCGACCTCCAAAGTGATAGTCTTTCCGGTA 1723 Query 44315 AGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| |||||||| Sbjct 1722 AGTGTTTTGACGAAAATTTGCAT 1700 >seq2672 Length=76086 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| ||||| | ||||| ||||| || || ||||| || || || Sbjct 17837 TTGCATACCACCTCGTAGTCTTAGTACCAGATGAAGGGTTGATTCTTTTTGAATATTATA 17896 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || || || | || |||| || || || |||||||| | ||| || ||||| Sbjct 17897 GTCACTAAGGGTACGGCCATCTTCCAATTGTTTGCCTGCAAAGATGAGACGTTGTTGATC 17956 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | |||||| || || ||||| ||||| | | | || | || | || Sbjct 17957 TGGTGGGATACCTTCTTTATCTTGGATCTTTTGCTTTACGTTGTCAATACTATCAGAAGA 18016 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||| || |||| ||||| || || || || || |||||||| ||||||||||| || Sbjct 18017 TTCAACTTCCAAAGTAATAGTTTTACCAGTAAGAGTCTTCACAAAGATTTGCATAAT 18073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359973197071257