Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20delemar_20[genbank_20GCA_5F000697155.1_202014-06-02] 3,921 sequences; 42,018,333 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2543 89.7 5e-13 seq175 89.7 5e-13 >seq2543 Length=10996 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| || ||| || || || || || ||||| || Sbjct 1470 CCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAA 1411 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || | || || || || || || || ||||||||||| | || Sbjct 1410 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGG 1351 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| || |||||||| ||| | | | | || ||||| || Sbjct 1350 ATGCCTTCCTTGTCTTGAATCTTTTGCTT-GACGTTTTCAATACTATCAGAAGACTCGAC 1292 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || |||||||| || || ||||| |||||||||||||| Sbjct 1291 TTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1244 >seq175 Length=1843 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| || ||| || || || || || ||||| || Sbjct 1242 CCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAA 1183 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || | || || || || || || || ||||||||||| | || Sbjct 1182 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGG 1123 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| || |||||||| ||| | | | | || ||||| || Sbjct 1122 ATGCCTTCCTTGTCTTGAATCTTTTGCTT-GACGTTTTCAATACTATCAGAAGACTCGAC 1064 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || |||||||| || || ||||| |||||||||||||| Sbjct 1063 TTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1016 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| || ||| || || || || || ||||| || Sbjct 1698 CCACCACGAAGACGAAGGACCAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCTGAA 1639 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || | || || || || || || || ||||||||||| | || Sbjct 1638 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAAATGAGACGCTGTTGGTCTGGAGGG 1579 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| || |||||||| ||| | | | | || ||||| || Sbjct 1578 ATGCCTTCCTTGTCTTGAATCTTTTGCTT-GACGTTTTCAATACTATCAGAAGACTCGAC 1520 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || |||||||| || || ||||| |||||||||||||| Sbjct 1519 TTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTGCAT 1472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462281341325200