Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq529 150 4e-31 seq34 145 2e-29 seq656 143 6e-29 seq862 138 2e-27 seq64 100 6e-16 seq1028 89.7 1e-12 seq317 89.7 1e-12 >seq529 Length=32659 Score = 150 bits (166), Expect = 4e-31 Identities = 447/677 (66%), Gaps = 12/677 (2%) Strand=Plus/Minus Query 318997 TCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCC 319056 |||||||| | | ||||||||||||||||| | ||| || || |||| | ||| Sbjct 30794 TCTTCACCAGTGTGGTAACGCCATTGGATATATTCGTTAGGGGTTTTGTCCAAGTGACGT 30735 Query 319057 TCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAA 319116 |||||||||||||||||||| || || || || |||| ||||| || ||||| |||| Sbjct 30734 TCGATGTGGTGGAAAGCATGTTGAGCGACATAGGCAATACGCAAGTTAGGATGTCTCCAG 30675 Query 319117 ACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCCCC 319176 ||| |||| | || || |||| || || | || ||| || | ||| || || Sbjct 30674 ACAGTACCAACCTCGGACTCGATTTCACCAGTCAACAGCTTGATCAAGGTAGACTTACCA 30615 Query 319177 GCACCGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCATTCACGTTG 319236 |||||||| ||| | || | | | |||| || || || | |||| | | || Sbjct 30614 GCACCGTTGGGGCCAATGACGGCAACACGGGAGGCAAGAGA-ACAT-TGCATGGA-GATG 30558 Query 319237 TCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCATG 319293 |||| | | | || || | ||| ||||||| ||| | || | ||||| | Sbjct 30557 TCAATCAGTTGCTTGCGGTCAGAACCAGGATACTGGAAGTCGACGTTCTTCATCTTCAAG 30498 Query 319294 ATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTG 319353 || ||||| ||||| | ||||||| || | ||| || ||||| ||||| || || Sbjct 30497 ATTGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGCTCAGGGAAAGAGAACTTG 30438 Query 319354 GTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTG-ATTCGGGACGCTTCTTCACGAACTC 319412 | | || | | || ||||||| || | | ||||| |||||| ||||| || Sbjct 30437 ATTTGAGTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGGAC-CTTCTTGACGAATTC 30379 Query 319413 GGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGT 319472 ||||| || |||||||| ||| ||||| ||| || ||||| || || || || Sbjct 30378 GGACAAGTTACCCTTGTAACGCTTGAGCTTATAGTTGGGCTCGTAGTGAATGATGTCGGA 30319 Query 319473 GCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAG 319532 || ||| || | ||| || |||||||| || ||||| | | | ||| ||| | Sbjct 30318 ACAGACATGATCCAAGAAACCAGAGTCGTGGGAGACAATGATAGAGGTAACAGTCTTCAA 30259 Query 319533 GTTGATCAGGTATTCAATCAACCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTCGGCT 319591 | ||||| | || ||| ||||| ||| ||| | || ||||| || | Sbjct 30258 ACCAAGAAGGTAGTTCTCCAGCCAGGCAACGTT-GACAACATCCAAGTGATTGGTAGGTT 30200 Query 319592 CGT-CAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATT 319650 ||| ||| ||| || | | ||||||| | ||| ||||| |||||||| || ||||| Sbjct 30199 CGTCCAACAAG-AGGATATCAGCGTTCATCAACATAGCACGGGCAAGAGCAAGCTTCATC 30141 Query 319651 TTCCACCCTCCGGAAAG 319667 ||||| || || || || Sbjct 30140 TTCCAACCACCAGAGAG 30124 >seq34 Length=132095 Score = 145 bits (160), Expect = 2e-29 Identities = 778/1218 (64%), Gaps = 64/1218 (5%) Strand=Plus/Minus Query 318485 TAATGACCACAACACCTCCGCCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCT 318544 ||| || |||||||| || ||| | | ||| | || |||| || || ||| | Sbjct 11708 TAACGATGACAACACCACCACCATATTCCTTGATAGCAGTAGCCAAAGCACCAAGAGATT 11649 Query 318545 CGCGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGT-TGTTGCCATAGA 318603 | || || | |||| || |||||||| | ||| | || ||| ||| |||| ||| | | Sbjct 11648 CACGATCCAAATAGTTAGTAGGTTCGTCAAGAACAAGCATGTGAGGTCTGTT-CCACATA 11590 Query 318604 GCAGCGCCAATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGA 318663 ||||| ||||| ||||| || | |||||| || ||||| |||||||| || ||||| ||| Sbjct 11589 GCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAGACCACGGATACGAGAGTGA 11530 Query 318664 GTTGTAAATTCAGGGTCGAGCCCAACATTTGCCATATGTTCTTCCACGTTCTTTGCGGTC 318723 || | ||||| || || || ||||| | |||| || | ||| | | ||| || ||| Sbjct 11529 GTGGCGAATTCGGGTTCAAGACCAACTTCAGCCAAGTGCTTTTCAATTTCCTTGGCAGTC 11470 Query 318724 AGTGGC---TTGA-ACATACCATTTGCAACGGCTTCTTTGGTATCAATATCG--TTCAGA 318777 | || |||| || | | || ||| ||||| | || |||| ||||| Sbjct 11469 AAAGGACGGTTGAGACCCATC-TTGGCA---GCTTC------AGCAGCATCGACTTCAGC 11420 Query 318778 AGTTTTC----CGAAACCATACTCCTCCAGGCGTTCG--CGGGACATCCATTGGGTAGTC 318831 | | ||| ||||||| | | || || || || | || || ||||| ||| | Sbjct 11419 AATCTTCTTACCGAAACCC-ATTTCTTCAAGC-TTGGAACGAGAGATCCA---GGTGTTG 11365 Query 318832 TCATC-GTTTTTCCACTGAACC--------TCGTACTCGTAAGATTTTTTCAGCTTGCGG 318882 ||| | | | || || || ||||| ||||| |||| || ||||| || Sbjct 11364 TCAACAGAGGAGCGACCGACCCAAGAGACTTCGTATTCGTAGGATTGCTTGAGCTTACGA 11305 Query 318883 CGACCAAGAATCTTGTCAAGAA-----TTTTC---TTCACTCCGTCAACGACTTTAGTGT 318934 ||||||| ||| |||| || ||||| ||| || ||| ||||| || Sbjct 11304 CGACCAACAATAGCTTCAACAACACGCTTTTCACCTTCGATCA--CAAAGACTT----GT 11251 Query 318935 CATACATCTTCTTTAGTTCTTCTTCGTTGTTCTTCCTAGAAACGACGTCAAGGGTCTCTT 318994 | ||| |||| | | ||||||| ||| || | | || || || Sbjct 11250 --TCCATGGCCTTTTGGTTTTCTTCGGCGTTGTTACGTTCATTCTTTTCGAGTTCTTCAC 11193 Query 318995 TGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGAT 319054 |||||||||| | ||||||||||| || || | |||||| || |||| | ||| Sbjct 11192 GATCTTCACCGGTGTGGTAACGCCATTGAATGTATTCGTTGGGGGTTTTGTCCAAGTGAC 11133 Query 319055 CCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCC 319114 |||||||||||||||||||| || || || || |||| ||||| || ||||| ||| Sbjct 11132 GTTCGATGTGGTGGAAAGCATGTTGAGCAACATAGGCAATACGCAAGTTAGGATGTCTCC 11073 Query 319115 AAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCC 319174 | ||| |||| | || ||| |||| || || | || ||| || | ||| || | Sbjct 11072 AGACAGTACCAACCTCGGATTCGATTTCACCAGTCAACAACTTGATCAAGGTAGACTTAC 11013 Query 319175 CCGCACCGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCATTCACGT 319234 | |||||||| || | || | | | ||| || || || | |||| | | Sbjct 11012 CAGCACCGTTGGGACCAATGACGGCAACACGAGAGGCAAGAGA-ACAT-TGCATGGA-GA 10956 Query 319235 TGTCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCA 319291 |||| | | | | || || | ||| || || | ||| | || | ||||| Sbjct 10955 TGTCGATCAATTGCTTGCGGTCAGAACCAGGGTATTGGAAGTCGACGTTCTTCATCTTCA 10896 Query 319292 TGATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACG 319351 ||| ||||| ||||| | ||||||| || | ||| || || || ||||| || Sbjct 10895 AGATAGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGTTCAGGGAAAGAGAACT 10836 Query 319352 TGGTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACT 319411 | | | || | | || ||||||| || | ||| |||||| ||||| | Sbjct 10835 TAATTTGAGTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGAACCTTCTTGACGAATT 10776 Query 319412 CGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGG 319471 |||||| || ||||| || ||| ||||| ||| || ||||| || || || || Sbjct 10775 CGGACAAGTTACCCTTATAACGCTTGAGCTTGTAGTTGGGCTCGTAGTGAATGATGTCGG 10716 Query 319472 TGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAA 319531 || ||| || | ||| || |||||||| || ||||| | | | | ||| ||| | Sbjct 10715 AACAGACATGATCCAAGAAACCAGAGTCGTGGGAGACAATGATGGAGGTAACAGTCTTCA 10656 Query 319532 GGTTGATCAGGTATTCAATCAACCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTCGGC 319590 | ||||| | |||||| ||||| ||| ||| | || ||||| || Sbjct 10655 AACCAAGGAGGTAGTTCTCCAACCAGGCAACGTT-GACAACATCCAAGTGATTGGTAGGT 10597 Query 319591 TCGT-CAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCAT 319649 |||| ||| ||| || | | ||||||| | ||| ||||| |||||||| || ||||| Sbjct 10596 TCGTCCAACAAG-AGGATATCAGCGTTCATCAACATGGCACGGGCAAGAGCAAGCTTCAT 10538 Query 319650 TTTCCACCCTCCGGAAAG 319667 ||||| || || || || Sbjct 10537 CTTCCAACCACCAGAGAG 10520 >seq656 Length=25916 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || |||||||| ||| | ||| | || |||||||||||||| ||||| ||| || Sbjct 661 CTCATCGGCATGAATTCTGCCTTGATGTGCCAATACATCGAATTCGTTGCCGATCGCCTT 602 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||||| ||||| | ||| || | |||| ||| || || |||| |||||||| Sbjct 601 ATGGTTGCTCTTGGATTCGACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGAC 542 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 | || || |||||||| |||||||||||||| |||||||||||| ||||||||| | Sbjct 541 ATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCTGACTATCAACGT 482 Query 230626 CCTGGTGTGATGAA 230639 ||||||| ||||| Sbjct 481 GCTGGTGTCATGAA 468 >seq862 Length=17893 Score = 138 bits (152), Expect = 2e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 230428 GACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 || ||| |||| ||||| || || ||||||||| ||| | ||| | ||||||||||| Sbjct 17584 GATGCTCTTCCC-GTCGCTCTCATCGGCATGAACTCTGCCTTGATGTGTCAGTACATCGA 17642 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 |||||| || || || | | ||||| ||||| | ||| || | |||| ||| || Sbjct 17643 ATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGATTCGACAAGATTTACATGGCTACCAA 17702 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 || |||| |||||||| | || || |||||||| |||||||||||||| |||||||| Sbjct 17703 TCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCG 17762 Query 230607 TGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 |||| ||| ||||| | ||||||| ||||| Sbjct 17763 TGTCTCTGATTATCAACGTGCTGGTGTCATGAA 17795 >seq64 Length=108624 Score = 100 bits (110), Expect = 6e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 318997 TCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCC 319056 |||||||||| | ||||||||||| || || | |||||| || |||| | ||| Sbjct 7064 TCTTCACCGGTGTGGTAACGCCATTGAATGTATTCGTTGGGAGTTTTGTCCAAGTGACGT 7005 Query 319057 TCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAA 319116 |||||||||||||||||||| || || ||||| |||| ||||| || ||||| |||| Sbjct 7004 TCGATGTGGTGGAAAGCATGTTGAGCGACGTAGGCAATACGCAAGTTAGGATGTCTCCAG 6945 Query 319117 ACACTACC 319124 ||| |||| Sbjct 6944 ACAGTACC 6937 >seq1028 Length=12910 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 318996 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 319055 ||||||||| | ||||||||||| || ||||| | ||| || ||| | || | || | Sbjct 3836 GTCTTCACCAGTAGCATAACGCCACTGAATATATTCGTTTGGCGTCTTATCCAAGTGTTG 3777 Query 319056 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 319115 |||||||| ||||| || || || || || || |||| ||| | ||| ||||||||||| Sbjct 3776 TTCGATGTGATGGAAGGCGTGTTGAGCAACATAGGCAATACGTAAATTGGGATGCTTCCA 3717 Query 319116 AACACTACC 319124 || |||| Sbjct 3716 CACCGTACC 3708 >seq317 Length=47789 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 318996 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 319055 ||||||||| | ||||||||||| || || || | ||| || ||| | || | || | Sbjct 32154 GTCTTCACCAGTAGCATAACGCCACTGAATGTATTCGTTTGGCGTCTTATCCAAGTGTTG 32095 Query 319056 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 319115 ||||||||| ||||| || || || || || || |||| ||| | ||| ||||||||||| Sbjct 32094 CTCGATGTGATGGAAGGCGTGTTGAGCAACATAGGCAATACGTAAATTGGGATGCTTCCA 32035 Query 319116 AACACTACC 319124 || |||| Sbjct 32034 TACCGTACC 32026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057802938063020