Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq453 205 7e-48 seq49 196 3e-45 >seq453 Length=36563 Score = 205 bits (226), Expect = 7e-48 Identities = 420/625 (67%), Gaps = 26/625 (4%) Strand=Plus/Minus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 ||||| || |||| ||||| ||||| | || | ||| || || ||||| || || || Sbjct 19546 TTAAGTGCGTCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCA 19487 Query 101738 CCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATG 101797 ||||| | |||| || ||||| |||||||||| || ||||| | ||| ||||| Sbjct 19486 CCAGGATCAAGATCTGTTACATGCGCAATCATGCGTGTCAAAAGTGCATAAGAGGCAATA 19427 Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTT 101857 || || || || || | ||||||||| || | |||||| || ||| || | ||| Sbjct 19426 TTGAAAGGAACACCCAGTCCCATATCACAAGAACGTTGATAAAGCACACAAGACAACTTG 19367 Query 101858 ---------CCATC------------ACAGACATAAAATTGACTTAATACATGACAAGGC 101896 ||||| | | ||||||||||||| || ||||||||||| Sbjct 19366 GCACGTCCGCCATCCTGAGGTGGATTAGATACATAAAATTGACAAAAGGCATGACAAGGC 19307 Query 101897 GGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCT 101956 || || |||| ||||||| |||| | ||||| || ||| | || || | ||| Sbjct 19306 GGTAAAGCCATGATAGGAATATCTGCAGGGTTCCATGCTGACAGAATGATTCTGCGATCA 19247 Query 101957 GTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTA 102016 ||||| || |||||||||| || |||| |||| |||||| |||| |||| ||| || Sbjct 19246 GTAGGATTGTTTTTTATAGTGTCGATCACTTGTTGTAATTGATCAATGCCTTGCCCTGTA 19187 Query 102017 TAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACA 102076 ||||| || | | |||| || || || || ||||| |||||||| || || Sbjct 19186 TAATCAGTATCACAATCAACGTATTTGGCACCAAAGTGTCTCCATTGAAATCCGTAGACT 19127 Query 102077 GGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGAT 102136 ||||||||||| |||||| | || | |||||| | || || | | || | ||| Sbjct 19126 GGTCCAAGATCACCTTCACGACGGTGAGTAAAACCTAACTTGTCGAGATATTCGCGAGAA 19067 Query 102137 CCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTTTGCTGTCAGTAGATCC 102195 || || |||||||||| | || | | ||| | ||||| || ||| ||| Sbjct 19066 CCGTTGCCATCCCAAATCTTGACATTTCTTTCACTTAGATGCTTTG-AGTTTGTATCTCC 19008 Query 102196 TCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAA 102255 | | || ||||| | ||||||||| | ||||| || | ||||| | ||| || || | Sbjct 19007 TTTAATGAACCAAAGCAGTTCTTCCAAGACACCCCTGAAGAATACACGCTTTGTTGTCAG 18948 Query 102256 AAGTGGAAAT---TCATTTTCTAAA 102277 |||||||||| |||| || |||| Sbjct 18947 AAGTGGAAATATATCATCTTTTAAA 18923 >seq49 Length=122128 Score = 196 bits (216), Expect = 3e-45 Identities = 418/625 (67%), Gaps = 26/625 (4%) Strand=Plus/Minus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 || || || |||| ||||| ||||| | || | ||| || || ||||| || || || Sbjct 120530 TTGAGTGCGTCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCA 120471 Query 101738 CCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATG 101797 ||||| | |||| || ||||| |||||||||| || ||||| | ||| |||||| Sbjct 120470 CCAGGATCAAGATCTGTTACATGCGCAATCATGCGTGTCAAAAGTGCATAAGAAGCAATA 120411 Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTT 101857 || || || || || | |||||||||| || | |||||| || ||| || | ||| Sbjct 120410 TTGAAAGGAACACCCAGCCCCATATCACAAGAACGTTGATAGAGCACACAAGATAACTTG 120351 Query 101858 ---------CCATC------------ACAGACATAAAATTGACTTAATACATGACAAGGC 101896 ||||| | | ||||||||||||| || |||||||||| Sbjct 120350 GCACGTCCGCCATCCTGCGGTGGATTAGATACATAAAATTGACAAAAGGCATGACAAGGT 120291 Query 101897 GGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCT 101956 || || |||| ||||||| |||| | ||||| || | | | || || | ||| Sbjct 120290 GGTAAAGCCATGATAGGAATATCTGCAGGGTTCCATGCTGATAGAATGATTCTGCGATCA 120231 Query 101957 GTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTA 102016 || || || |||||||||| ||||||| |||| |||||| |||| |||| |||| || Sbjct 120230 GTGGGATTGTTTTTTATAGTGTCAATCACTTGTTGTAATTGATCAATGCCTTGTCCTGTA 120171 Query 102017 TAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACA 102076 ||||| || | | |||| || || || || ||||| |||||||| || || Sbjct 120170 TAATCAGTATCACAATCAACGTATTTGGCACCAAAGTGTCTCCATTGAAATCCGTAGACT 120111 Query 102077 GGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGAT 102136 ||||||||||| |||||| | || | || ||| | || || | | || | ||| Sbjct 120110 GGTCCAAGATCGCCTTCACGACGGTGAGTAAGACCCAACTTGTCGAGATATTCGCGAGAA 120051 Query 102137 CCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTTTGCTGTCAGTAGATCC 102195 || || |||||||||| | ||| | | ||| | ||||| || ||| ||| Sbjct 120050 CCGTTGCCATCCCAAATCTTGACGTTTCTTTCACTTAGATGCTTTG-AGTTTGTATCTCC 119992 Query 102196 TCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAA 102255 | | || ||||| | ||| ||||| | || || || | ||||| | ||| || || | Sbjct 119991 TTTAATGAACCAAAGCAGCTCTTCCAAGACTCCCCTGAAGAATACACGCTTTGTTGTCAG 119932 Query 102256 AAGTGGAAAT---TCATTTTCTAAA 102277 |||||||||| |||| || |||| Sbjct 119931 AAGTGGAAATATATCATCTTTTAAA 119907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361244358128054