Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq453 143 2e-29 >seq453 Length=36563 Score = 143 bits (158), Expect = 2e-29 Identities = 424/653 (65%), Gaps = 27/653 (4%) Strand=Plus/Minus Query 97000 TTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGT--AAGCTGCTCTGTGAGAGCATCAATGT 97057 |||| || ||||||||| |||| ||| ||| || ||| | | || || |||| | Sbjct 19588 TTTAAAGTAGGGAAAGGCTTGGG--TTCACGTTGAATCTGTTGCTTAAGTGCGTCAAGAT 19531 Query 97058 GATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAG 97117 ||| |||||||| || | ||| || | || || || ||||| |||||| | | ||| | Sbjct 19530 GATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCACCAGGATCAAGATCTG 19471 Query 97118 TGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTA 97177 | ||||| || ||||| | || || || | ||| ||||| || ||||| || || | Sbjct 19470 TTACATGCGCAATCATGCGTGTCAAAAGTGCATAAGAGGCAATATTGAAAGGAACACCCA 19411 Query 97178 GTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTT------TCC-------- 97223 ||||||||||| || | |||||| | | ||| || | ||| ||| Sbjct 19410 GTCCCATATCACAAGAACGTTGATAAAGCACACAAGACAACTTGGCACGTCCGCCATCCT 19351 Query 97224 -------ATCACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTG 97276 || | | |||||||| |||| || ||||||| || || || ||||| | | Sbjct 19350 GAGGTGGATTAGATACATAAAATTGACAAAAGGCATGACAAGGCGGTAAAGCCATGATAG 19291 Query 97277 GAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTA 97336 ||| |||| ||||| || ||| | ||||| | ||| || || || | | || Sbjct 19290 GAATATCTGCAGGGTTCCATGCTGACAGAATGATTCTGCGATCAGTAGGATTGTTTTTTA 19231 Query 97337 TGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGAC 97396 | || | || | || | ||||||||||| ||||| || ||||| | | | Sbjct 19230 TAGTGTCGATCACTTGTTGTAATTGATCAATGCCTTGCCCTGTATAATCAGTATCACAAT 19171 Query 97397 CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTT 97456 | |||| || ||||| || |||||||| ||||| || || |||||||| || |||| Sbjct 19170 CAACGTATTTGGCACCAAAGTGTCTCCATTGAAATCCGTAGACTGGTCCAAGATCACCTT 19111 Query 97457 CTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAA 97516 | | | | ||||| | ||| || | ||| | ||| || || ||||||||| Sbjct 19110 CACGACGGTGAGTAAAACCTAACTTGTCGAGATATTCGCGAGAACCGTTGCCATCCCAAA 19051 Query 97517 TGTGCACACCAGATGCTGCAAGCT-CTTTGCTGTCAGTAGATCCTCTGATAAACCACAAC 97575 | | ||| | | || | ||||| || ||| |||| | || ||||| | | Sbjct 19050 TCTTGACATTTCTTTCACTTAGATGCTTTG-AGTTTGTATCTCCTTTAATGAACCAAAGC 18992 Query 97576 AATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | |||||||| ||||| || | ||||| | ||| ||||| | || ||||| Sbjct 18991 AGTTCTTCCAAGACACCCCTGAAGAATACACGCTTTGTTGTCAGAAGTGGAAA 18939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346777432127780