Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq453 179 3e-40 seq49 179 3e-40 >seq453 Length=36563 Score = 179 bits (198), Expect = 3e-40 Identities = 401/601 (67%), Gaps = 31/601 (5%) Strand=Plus/Plus Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266 |||||| || || ||| | || || || || ||||||||||||||||| ||||| || Sbjct 19102 ACCGTCGTGAAGGTGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCA 19161 Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326 |||| ||||| | || ||||| || ||||| | |||||||||||| | || | Sbjct 19162 AATACGTTGATTGTGATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGA 19221 Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386 | | || |||| || || | || | ||||| ||| | | || |||||| || Sbjct 19222 TCGACACTATAAAAAACAATCCTACTGATCGCAGAATCATTCTGTCAGCATGGAACCCTG 19281 Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA 20446 |||| | ||| | |||||||| || || |||||| | || |||||||| || ||| Sbjct 19282 CAGATATTCCTATCATGGCTTTACCGCCTTGTCATGCCTTTTGTCAATTTTATGTATCTA 19341 Query 20447 ATA---------ATG------------AATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 || ||| | ||||| ||| | |||||||| || || Sbjct 19342 ATCCACCTCAGGATGGCGGACGTGCCAAGTTGTCTTGTGTGCTTTATCAACGTTCTTGTG 19401 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 ||||||||||||||||||||||||||||||| |||||| || | || ||||||| Sbjct 19402 ATATGGGACTGGGTGTTCCTTTCAATATTGCCTCTTATGCACTTTTGACACGCATGATTG 19461 Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605 | ||||| |||||| | | | ||||| || | || || || || || | ||| ||| Sbjct 19462 CGCATGTAACAGATCTTGATCCTGGTGAATTCATACATACAATGGGCGATACACATGTTT 19521 Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAA 20665 | | ||||| | || | | || |||| | ||| |||| || | ||||| | Sbjct 19522 ATGTGGATCATCTTGACGCACTTAAGCAACAGATTCAACGTGAACCCAAGCCTTTCCCTA 19581 Query 20666 CTCTTCGCATTACTCGAACTGTTAA--AGATATTAACGAT--TTTAAAG-CTGATGATTT 20720 || | | | || ||| || || ||||| || |||| ||| ||| ||| ||||| Sbjct 19582 CTTT----AAAAATC-AACCGTAAAGTAGATACTATCGATGATTTCAAGTTTGAAGATTT 19636 Query 20721 TGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAATATAT 20780 ||||||||| || ||||| || | | ||| |||| |||||||||| ||||| || Sbjct 19637 TGTGTTAGAGAACTACAATCCTCACAGTAAAATAGAAATGAAAATGTCTGTCTAATAAAT 19696 Query 20781 A 20781 | Sbjct 19697 A 19697 >seq49 Length=122128 Score = 179 bits (198), Expect = 3e-40 Identities = 401/601 (67%), Gaps = 31/601 (5%) Strand=Plus/Plus Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266 |||||| || || ||| | || || || || ||||||||||||||||| ||||| || Sbjct 120086 ACCGTCGTGAAGGCGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCA 120145 Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326 |||| ||||| | || ||||| |||||||| | |||||||||||| | || | Sbjct 120146 AATACGTTGATTGTGATACTGATTATACAGGACAAGGCATTGATCAATTACAACAAGTGA 120205 Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386 || | || |||| || || | || | ||||| ||| ||| || |||||| || Sbjct 120206 TTGACACTATAAAAAACAATCCCACTGATCGCAGAATCATTCTATCAGCATGGAACCCTG 120265 Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA 20446 |||| | ||| | |||||||| || || |||||| | || |||||||| || ||| Sbjct 120266 CAGATATTCCTATCATGGCTTTACCACCTTGTCATGCCTTTTGTCAATTTTATGTATCTA 120325 Query 20447 AT---------AATG------------AATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 || ||| | || || ||| | |||||||| || || Sbjct 120326 ATCCACCGCAGGATGGCGGACGTGCCAAGTTATCTTGTGTGCTCTATCAACGTTCTTGTG 120385 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 ||||||| ||||||||||||||||||||||| |||||| || | || ||||||| Sbjct 120386 ATATGGGGCTGGGTGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTG 120445 Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605 | ||||| |||||| | | | ||||| || | || || || || || | ||| ||| Sbjct 120446 CGCATGTAACAGATCTTGATCCTGGTGAATTCATACATACAATGGGCGATACACATGTTT 120505 Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAA 20665 | | ||||| | || | | || |||| | ||| |||| |||| ||||| | Sbjct 120506 ATGTGGATCATCTTGACGCACTCAAGCAACAGGTTCAACGTGAACCCAAACCTTTCCCTA 120565 Query 20666 CTCTTCGCATTACTCGAACTGTTAA--AGATATTAACGAT--TTTAAAG-CTGATGATTT 20720 || | | | || ||| || || ||||| || |||| ||| ||| ||| ||||| Sbjct 120566 CTTT----AAAAATC-AACCGTAAAGTAGATACTATCGATGATTTCAAGTTTGAAGATTT 120620 Query 20721 TGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAATATAT 20780 ||| ||||| || | ||| || | | ||| |||| |||||||||| ||||| || Sbjct 120621 TGTATTAGAGAACTACAGTCCTCACAGTAAAATAGAAATGAAAATGTCTGTCTAATAAAT 120680 Query 20781 A 20781 | Sbjct 120681 A 120681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399176439704530