Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq71 111 1e-19 seq686 95.1 9e-15 seq769 89.7 4e-13 >seq71 Length=102704 Score = 111 bits (122), Expect = 1e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| |||| |||||| || ||||| ||||| ||||||||||| | Sbjct 21480 CCACCACGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTC 21539 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||| || | |||||| || ||| |||||||||| ||||| || || Sbjct 21540 AAAGTACGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGG 21599 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||| || ||| | ||||||||| | | | | | | ||| | ||| | Sbjct 21600 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACT 21659 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAA 18332 || | || || | |||||||| | || ||||| || |||||||||||| || Sbjct 21660 TCTAAAGTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTTTTAA 21713 >seq686 Length=24674 Score = 95.1 bits (104), Expect = 9e-15 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 18091 TTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGT 18150 ||| || || || || || | ||| |||| |||||| || ||||||||||||||||| | Sbjct 10783 TTTATTGACCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTAT 10724 Query 18151 AGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGAT 18210 | || || || || ||||| | |||||| || || | || || | |||||| | Sbjct 10723 AATCACTCAAAGTACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGT 10664 Query 18211 CCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGG 18270 | || | ||||||||||| ||| | ||||||||| | | | | | | ||| | Sbjct 10663 CAGGAGGGATACCTTCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAG 10604 Query 18271 GCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTA 18330 || ||| | || || | |||||||| | || ||||| || |||||||||||| Sbjct 10603 ATTCAACTTCTAAAGTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTTTT 10544 Query 18331 AA 18332 || Sbjct 10543 AA 10542 >seq769 Length=21522 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| |||| |||||| || ||||| ||||||||||| |||||| Sbjct 14295 CCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTT 14236 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| | |||||| || ||| |||| || | ||||||||| || Sbjct 14235 AGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 14176 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||| || ||| | ||| || || | | | ||||||| | || | Sbjct 14175 ATACCTTCCTTGTCTTGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCAACT 14116 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || | || || || | ||| || ||||| |||||||| Sbjct 14115 TCTAAAGTAATTGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 14069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379336815461730