Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq145 178 2e-39 seq107 178 2e-39 >seq145 Length=75589 Score = 178 bits (196), Expect = 2e-39 Identities = 357/526 (68%), Gaps = 4/526 (1%) Strand=Plus/Minus Query 193645 CTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGT 193704 ||||| | || ||||||| |||||| |||||| || || || ||||| ||| |||| | Sbjct 44754 CTGAGGTTTACAATCTTGCAGCTCAATCTCATGTCAAGGTCTCTTTTGACATGTCAGAAT 44695 Query 193705 ATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGG 193764 |||| | | || || ||| | || || ||| | | ||||| || | |||| ||| Sbjct 44694 ATACCGGTGACGTCGACGCTCTTGGCACACTTCGTTTGCTTGATGCTATCCGTAC-TTGC 44636 Query 193765 GAATGGA--GAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822 | | | || | |||||| ||||||| || ||||| ||||| |||||| || Sbjct 44635 GGTTTAACCGATCG-TGTTCGTTTCTATCAAGCTTCTACTTCTGAACTCTATGGTAAAGT 44577 Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882 | | || || | | ||||| ||||| || |||| || ||||||||||||||||| Sbjct 44576 AGTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCTCCTTATGGTGTAGC 44517 Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAG 193942 ||| | ||||| |||||||| | || || ||||| ||||| | || | Sbjct 44516 CAAGCTTTATGGCTATTGGATTACGGTCAACTACCGTGAATCATACAACATGTTTGCCTG 44457 Query 193943 TTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAA 194002 | |||||||||||||| || ||||| || | | ||| || || || || || || Sbjct 44456 TAACGGTATTCTCTTCAACCATGAATCGCCTCGTCGTGGTCGTACCTTCGTTACCCGAAA 44397 Query 194003 GATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAA 194062 ||||| | | | | | | ||| | ||| || || |||||||| ||||| Sbjct 44396 GATTAGTCGTGCTGTTGCAGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTAA 44337 Query 194063 TCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAAT 194122 | || |||||||| | ||||||||||| || |||||||| || | |||||| | || Sbjct 44336 TATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAGGGTATGTGGCTCAT 44277 Query 194123 GTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 | |||| || ||| |||| | |||| ||| | ||||| |||||| Sbjct 44276 GCTGCAGCAAGATCAACCTCAAGATTTTGTCTTGGCTACTGGTGAA 44231 >seq107 Length=86639 Score = 178 bits (196), Expect = 2e-39 Identities = 357/526 (68%), Gaps = 4/526 (1%) Strand=Plus/Minus Query 193645 CTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGT 193704 |||| | || ||||||| |||||| |||||| || || || ||||| ||| |||| | Sbjct 58048 CTGAAGTTTACAATCTTGCAGCTCAATCTCATGTCAAGGTCTCTTTTGACATGTCAGAAT 57989 Query 193705 ATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGG 193764 |||| | | || || ||| | || || ||| | ||||||| || | |||| ||| Sbjct 57988 ATACCGGTGACGTCGACGCTCTTGGCACACTTCGTTTACTTGATGCTATCCGTAC-TTGT 57930 Query 193765 GAATGGA--GAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822 | | | || | |||||| ||||||| || |||||| ||||| |||||| || Sbjct 57929 GGTTTAACCGATCG-TGTTCGTTTCTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGT 57871 Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882 | | || || | | ||||| ||||| || |||| || || |||||||||||||| Sbjct 57870 AGTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGC 57811 Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAG 193942 ||| | |||||||||||||| | || || ||||| ||||| | || | Sbjct 57810 CAAGCTTTATGGTTATTGGATTACGGTCAACTACCGTGAATCATACAATATGTTTGCCTG 57751 Query 193943 TTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAA 194002 | ||||||||||||||| || ||||| || | | || || || || || || || Sbjct 57750 TAATGGTATTCTCTTCAACCATGAATCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAA 57691 Query 194003 GATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAA 194062 |||||| | | | | | | ||| | ||| || || |||||||| ||||| Sbjct 57690 GATTACTCGTGCTGTCGCAGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTAA 57631 Query 194063 TCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAAT 194122 | || |||||||| | ||||||||||| || |||||||| |||| |||||| | || Sbjct 57630 TATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCAT 57571 Query 194123 GTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 | | || || ||| | || | |||| || | ||||| |||||| Sbjct 57570 GCTACAGCAAGATCAGCCTCAAGATTTCGTCTTGGCTACTGGTGAA 57525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807539513240240