Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq769 159 3e-34 seq243 149 6e-31 seq686 122 8e-23 seq80 120 3e-22 seq656 113 4e-20 seq439 113 4e-20 seq175 113 4e-20 >seq769 Length=21522 Score = 159 bits (176), Expect = 3e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26753 TTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCAT 26812 |||||| | ||| |||||| | ||||| || ||| | |||||||| | || || | Sbjct 14053 TTTTTATAAATACATCATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTT 14112 Query 26813 CGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 26872 ||| | ||||| ||||| ||||| | || |||||||||||| ||||| ||||| Sbjct 14113 AGAAGTTGAATCTTCTGACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGG 14172 Query 26873 GATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA 26932 || ||||| ||||||||| | ||||| | | || |||||||||||||||| | | | Sbjct 14173 TATTCCTCCTGATCAACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTAC 14232 Query 26933 CGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | | |||||||||||||||||||| ||||||||| | || ||||||| Sbjct 14233 CCTAAGCGACTATAACATTCAAAAGGAATCTACTCTTCACTTGGTCCT 14280 >seq243 Length=56764 Score = 149 bits (164), Expect = 6e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || ||| | |||||||| ||| || | ||| | || || Sbjct 38077 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGATGATTACTTTAGAAGTCGAGTCTTCT 38018 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || |||||||| ||| ||||| ||||| || ||||| |||||| Sbjct 38017 GACACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 37958 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | || |||||||||||||||| | | | | | |||||||||||| Sbjct 37957 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAAC 37898 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||||||| | ||| ||||||| Sbjct 37897 ATCCAAAAGGAATCTACTCTTCATTTGGTCCT 37866 >seq686 Length=24674 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 ||||||||| | || ||||| || | || || || | || || | ||| | ||||| Sbjct 10546 AAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACAATTACTTTAGAAGTTGAATCT 10605 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || | ||||| | ||||| ||||||||| || || ||||| || ||||| || Sbjct 10606 TCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGAC 10665 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 |||||| | ||||||| || || |||||||||||||| | | | | | || || ||| Sbjct 10666 CAACAACGTCTCATTTTCGCTGGTAAACAACTCGAAGACGGTCGTACTTTGAGTGATTAT 10725 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||||||||||||||||| | || |||| || Sbjct 10726 AACATTCAAAAAGAATCTACTCTTCACTTGGTTCT 10760 >seq80 Length=97372 Score = 120 bits (132), Expect = 3e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||| || | ||||| ||||||||| ||||| ||||| || ||||| || || Sbjct 13815 CGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCA 13756 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||| | || || | | ||| |||||||||||||| | | | | | | ||||||||||| Sbjct 13755 ACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGCGACTATAA 13696 Query 26948 CATTCAAAAAGAATCTACTATCCA 26971 ||| ||||| ||||||||| |||| Sbjct 13695 CATCCAAAAGGAATCTACTCTCCA 13672 >seq656 Length=25916 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 119655 ACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAA 119714 ||||| |||||||| || || |||||||| | |||||| || | | |||||| || || Sbjct 498 ACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAAT 557 Query 119715 GGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACA 119774 ||||| | || || || ||||||| | || | | | || || ||||| || || Sbjct 558 GGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATAAGGCGATCGGCAACG 617 Query 119775 AACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCA 119834 || |||||||||| |||||| | ||||||||||| | | ||| || || | |||| Sbjct 618 AATTCGATGTATTGGCACATCAAGGCAGAATTCATGCCGATGAGAGCAACGGGAAGAGCA 677 Query 119835 TTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 | || || || |||| ||||||| ||| ||||| Sbjct 678 TCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTC 712 >seq439 Length=37054 Score = 113 bits (124), Expect = 4e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| |||||||| || || ||||| || ||||| |||||| Sbjct 23434 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 23493 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| || ||| |||||||||||||| | | | | | | || || || ||| Sbjct 23494 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 23553 Query 26949 ATTCAAAAAGAATCTAC 26965 |||||||| |||||||| Sbjct 23554 ATTCAAAAGGAATCTAC 23570 >seq175 Length=68572 Score = 113 bits (124), Expect = 4e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| |||||||| || || ||||| || ||||| |||||| Sbjct 14384 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 14443 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| || ||| |||||||||||||| | | | | | | || || || ||| Sbjct 14444 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 14503 Query 26949 ATTCAAAAAGAATCTAC 26965 |||||||| |||||||| Sbjct 14504 ATTCAAAAGGAATCTAC 14520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478653101982880