Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq243 134 1e-26 seq769 131 1e-25 seq686 107 2e-18 seq71 104 2e-17 seq439 102 7e-17 seq175 102 7e-17 seq80 100 2e-16 seq862 89.7 4e-13 >seq243 Length=56764 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||| | |||||||| |||||| | ||||||||| | Sbjct 38077 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGATGATTACTTTAGAAGTCGAGTCTTCT 38018 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || |||||||| ||| ||||| ||||| || ||||| |||||| Sbjct 38017 GACACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 37958 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | || || ||||||||||||| | | | | ||||| |||||| Sbjct 37957 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAAC 37898 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| |||||||| ||||||| || Sbjct 37897 ATCCAAAAGGAATCTACTCTTCATTTGGT 37869 >seq769 Length=21522 Score = 131 bits (144), Expect = 1e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 23975 TTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCAT 24034 |||||| | ||| |||||| | ||||| || ||| | |||||||| | ||||| | Sbjct 14053 TTTTTATAAATACATCATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTT 14112 Query 24035 CGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 24094 ||||| || | ||||| ||||| | || |||||||||||| ||||| ||||| Sbjct 14113 AGAAGTTGAATCTTCTGACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGG 14172 Query 24095 CATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAA 24154 || ||||| |||||||| | || || | | || || ||||||||||||| | | Sbjct 14173 TATTCCTCCTGATCAACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTAC 14232 Query 24155 CGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | | ||||| |||||||||||||| |||||||| |||| || || Sbjct 14233 CCTAAGCGACTATAACATTCAAAAGGAATCTACTCTTCACTTGGT 14277 >seq686 Length=24674 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 ||||||||| | || ||||| || | || || || | ||||| | ||||| || | Sbjct 10546 AAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACAATTACTTTAGAAGTTGAATCT 10605 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 || | ||||| | ||||| ||||||||| || || ||||| || ||||| || Sbjct 10606 TCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGAC 10665 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||| | || |||| || || || ||||||||||| | | | | || |||||| Sbjct 10666 CAACAACGTCTCATTTTCGCTGGTAAACAACTCGAAGACGGTCGTACTTTGAGTGATTAT 10725 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||||||||||||||| |||| || || Sbjct 10726 AACATTCAAAAAGAATCTACTCTTCACTTGGT 10757 >seq71 Length=102704 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 ||||||||| | || ||||| || | || || || ||||||| | |||||||| | Sbjct 21709 AAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATCT 21650 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 || | ||||| | ||||| ||||||||| ||||| ||||| || ||||| || Sbjct 21649 TCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGAC 21590 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||||||||| || | | || || ||||| || |||| | | | || || || Sbjct 21589 CAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTAC 21530 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| ||||| |||||||| |||| || || Sbjct 21529 AACATCCAAAAGGAATCTACCCTTCACTTGGT 21498 >seq439 Length=37054 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||||| || || ||||| || ||||| |||||| Sbjct 23434 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 23493 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || ||| || ||||||||||| | | | | | || ||||| ||| Sbjct 23494 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 23553 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| |||||||| |||| || || Sbjct 23554 ATTCAAAAGGAATCTACCCTTCACTTGGT 23582 >seq175 Length=68572 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||||| || || ||||| || ||||| |||||| Sbjct 14384 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 14443 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || ||| || ||||||||||| | | | | | || ||||| ||| Sbjct 14444 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 14503 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| |||||||| |||| || || Sbjct 14504 ATTCAAAAGGAATCTACCCTTCACTTGGT 14532 >seq80 Length=97372 Score = 100 bits (110), Expect = 2e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||| || | ||||| ||||||||| ||||| ||||| || ||||| || || Sbjct 13815 CGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCA 13756 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || || | | ||| || ||||||||||| | | | | | ||||| ||||| Sbjct 13755 ACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGCGACTATAA 13696 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||| |||||||| | || ||||| Sbjct 13695 CATCCAAAAGGAATCTACTCTCCACTTAGT 13666 >seq862 Length=17893 Score = 89.7 bits (98), Expect = 4e-13 Identities = 298/457 (65%), Gaps = 25/457 (5%) Strand=Plus/Minus Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661 || || |||||||| || || |||||||| | ||||| || | | |||||| || || Sbjct 17765 ACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAAT 17706 Query 104662 GGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACA 104721 ||||| || | | || || ||| | ||||| | | || || ||||| || || Sbjct 17705 GGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAGACGATCAGCAACG 17646 Query 104722 AATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGCG 104781 ||||||||||||| ||||| | | |||||||| | | |||||||| | ||| Sbjct 17645 AATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGCGACGGGAAGAGCA 17586 Query 104782 TTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTCCTTAAACATGTTCAGCACCTT---G 104838 | || ||||| |||| || ||| || |||||| || ||| | |||| | Sbjct 17585 TCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCC---AAGATG---ATATCCTTGACG 17532 Query 104839 CTTTCAGAAAGCTTGTCCTCTTTGGCAATATATTTGTTGTAATAGAGGCAGGCAAAGTCT 104898 | ||| ||| | | ||| | || | | | | | | || || |||||||| Sbjct 17531 CGTTC--TTGGCTAGGACGCTTACG-AAGA---TGGGTAAATAAAAGACAAGCAAAGTCA 17478 Query 104899 GTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGGTA-GAG- 104956 || || | |||||||| | | | || | ||| |||||| | ||||| || || | || Sbjct 17477 GTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGA 17418 Query 104957 CCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGACAC 105016 || | ||||||| | | | |||||| |||||| ||| ||||| |||| || Sbjct 17417 CCACGTTTTTTGAGCC--------AAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATAC 17366 Query 105017 CTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAA 105053 ||||||| ||||| || || | ||||| || || Sbjct 17365 CTTCGACAGCAGCAAAGGCAACAAGACGTTCAGCAAA 17329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429927857280870