Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq243 105 6e-18 seq769 102 7e-17 seq686 82.4 6e-11 >seq243 Length=56764 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| |||||||| || || || ||||| | ||||| | ||| ||||| Sbjct 38077 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGATGATTACTTTAGAAGTCGAGTCTTCT 38018 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | |||| ||||||||||||||| || || ||||| | || |||||| Sbjct 38017 GACACTATCG-ACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCA 37959 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | || || | ||| || |||||| | ||||||| ||| | ||| ||||| Sbjct 37958 ACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAA 37899 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||| ||||| || |||||| | ||| |||| Sbjct 37898 CATCCAAAAGGAATCTACTCTTCATTTGGT 37869 >seq769 Length=21522 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| |||||||| || || || ||||| || ||||| | ||| || || Sbjct 14069 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTTGAATCTTCT 14128 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | |||| ||||||||||| ||| || || ||||| | || |||||| Sbjct 14129 GACACTATCG-ACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCA 14187 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | || || | ||| || |||||| | ||||||| ||| | ||| ||||| Sbjct 14188 ACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAA 14247 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||||||| || |||||| | || |||| Sbjct 14248 CATTCAAAAGGAATCTACTCTTCACTTGGT 14277 >seq686 Length=24674 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 |||||||||||| || || || || || || || || || ||||| | ||| || || Sbjct 10545 AAAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACAATTACTTTAGAAGTTGAATC 10604 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 || | | | | | | || || ||||| ||| ||||| ||||| |||| ||| Sbjct 10605 TTCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGA 10664 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || ||| | || |||| || || |||||| | ||||| | || || ||||| Sbjct 10665 CCAACAACGTCTCATTTTCGCTGGTAAACAACTCGAAGACGGTCGTACTTTGAGTGATTA 10724 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||||||||||||| |||||| | || |||| Sbjct 10725 TAACATTCAAAAAGAATCTACTCTTCACTTGGT 10757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425335944250480