Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq71 125 7e-24 seq686 98.7 9e-16 seq439 96.9 3e-15 seq175 96.9 3e-15 seq815 82.4 7e-11 >seq71 Length=102704 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | ||| || |||||||| |||||||| || ||| Sbjct 21252 CCGCCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTC 21311 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| ||| | || | ||| || ||||| ||||| Sbjct 21312 AAAGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGAGGA 21371 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||||||| | || | | |||| | |||||| | Sbjct 21372 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTTTCAATACTATCAGAGGACTCAACC 21431 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || ||||| || || || || ||||| Sbjct 21432 TCCAAGGTAATGGTCTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 21478 >seq686 Length=24674 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | || || || ||||||||||| ||||| ||| Sbjct 10775 CCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTC 10716 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || || || || || ||| | || | ||| || ||||| |||||| Sbjct 10715 AAAGTACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGG 10656 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || || || ||||||| | || | | |||| | || || | Sbjct 10655 ATACCTTCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCAACT 10596 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || ||||| ||||| |||||||| || ||||| Sbjct 10595 TCTAAAGTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 10549 >seq439 Length=37054 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||| || |||||||||||||||||||| ||| Sbjct 23600 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 23541 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || || || || ||| | || | ||| || || || |||||| Sbjct 23540 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 23481 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA 131158 || ||||| || || ||| || ||||||| Sbjct 23480 ATACCTTCCTTATCTTGGATCTTTTGCTTGA 23450 >seq175 Length=68572 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||| || |||||||||||||||||||| ||| Sbjct 14550 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 14491 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || || || || ||| | || | ||| || || || |||||| Sbjct 14490 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 14431 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA 131158 || ||||| || || ||| || ||||||| Sbjct 14430 ATACCTTCCTTATCTTGGATCTTTTGCTTGA 14400 >seq815 Length=19846 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 145625 GCGATCGACGCCAAATTACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTC 145683 || || || ||||| ||||| || || || || || ||| ||||| || || || Sbjct 16665 GCAATGGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTCGA-GTATTCAACAATTTC 16723 Query 145684 GGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCA 145743 | |||| ||||| |||||||| || |||| |||||||||||||| || ||||| || Sbjct 16724 TGTACACAGGTTGCTGCATTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACA 16783 Query 145744 CGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCC 145780 || ||||| ||||| ||| |||| || |||||| Sbjct 16784 AGCATCCTTATAGAGTATGAACGGATTACCTGTCTCC 16820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472003631151360