Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq71 95.1 9e-15 seq769 84.2 2e-11 >seq71 Length=102704 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 ||||||||||| || | || || | || ||||| || ||||| | ||| ||| | Sbjct 21709 AAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATCT 21650 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 | || | | | || | |||||||| ||| || || || ||| | ||| || Sbjct 21649 TCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGAC 21590 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||||||||||||||||||||| |||||||| || ||| ||| || || ||| Sbjct 21589 CAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTAC 21530 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || ||||||||||| ||||| |||| | ||| | || || || Sbjct 21529 AACATCCAAAAGGAATCTACCCTTCACTTGGTCCTTCGTCTTCGTGGTGG 21480 >seq769 Length=21522 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || ||| | || || || || ||||| | ||| ||| | | Sbjct 14069 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTTGAATCTTCT 14128 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || ||||| ||| || || || ||| | ||| | ||| Sbjct 14129 GACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 14188 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGAT--TTAAAAACTATGGCCGATTACA 22011 || | || ||||||||||| |||||||| |||||| | | ||| | ||| || | Sbjct 14189 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAG--CGACTATA 14246 Query 22012 ATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 | ||||| ||||||||||||||||| |||| | ||| | || || || Sbjct 14247 ACATTCAAAAGGAATCTACTCTTCACTTGGTCCTTCGTCTCCGTGGTGG 14295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358118017340116