Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq686 163 2e-35 seq71 158 1e-33 seq769 156 4e-33 seq243 150 2e-31 seq80 140 3e-28 seq439 129 5e-25 seq175 127 2e-24 seq83 89.7 4e-13 >seq686 Length=24674 Score = 163 bits (180), Expect = 2e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||||||||| || | | ||| || || | |||||||||||||||||||| ||||| || Sbjct 10776 ACCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACT 10717 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||||| ||||| ||||||||||||||| | |||||||| |||||||| ||||| Sbjct 10716 CAAAGTACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGG 10657 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || ||||| || || ||||||||| || | | ||| | | || | ||||| || Sbjct 10656 GATACCTTCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCAAC 10597 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || |||||||| ||||| ||||| || || ||||| Sbjct 10596 TTCTAAAGTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 10549 >seq71 Length=102704 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | |||||||| ||||| |||||||| || Sbjct 21477 ATACCACCACGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCA 21536 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||||| ||| ||||||||||||||||| |||| || | ||||||||| ||| Sbjct 21537 CTCAAAGTACGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGA 21596 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||||||| || | | ||| | | || | |||||| Sbjct 21597 GGGATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCG 21656 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| |||||||| ||||| ||||| || || ||||| Sbjct 21657 ACTTCTAAAGTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 21706 >seq769 Length=21522 Score = 156 bits (172), Expect = 4e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | |||||||| ||||||||||| || ||| Sbjct 14298 ATACCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCG 14239 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | |||||| |||||| |||||||||||||| |||||||||| ||||| || ||| Sbjct 14238 CTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGA 14179 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||||||||||| | || | ||||| | ||||| Sbjct 14178 GGAATACCTTCCTTGTCTTGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCA 14119 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | || || || || || || || ||||| || |||||| Sbjct 14118 ACTTCTAAAGTAATTGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATG 14068 >seq243 Length=56764 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | |||||||| ||||| ||||| || ||| Sbjct 37848 ATACCACCACGGAGACGAAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCG 37907 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | |||||| |||||| |||||||||||||| |||||||||| ||||| || ||| Sbjct 37908 CTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGA 37967 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||| |||||||||| | || | ||||| | || ||| Sbjct 37968 GGAATACCTTCCTTGTCTTGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCG 38027 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | | | || || || || || || ||||| || |||||| Sbjct 38028 ACTTCTAAAGTAATCATCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATG 38078 >seq80 Length=97372 Score = 140 bits (154), Expect = 3e-28 Identities = 134/172 (78%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | |||||| || | |||||||| ||||| ||||| || ||| Sbjct 13645 ATACCACCACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCG 13704 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| ||||| ||||||||||| || |||| ||||| |||||||| ||| Sbjct 13705 CTCAAGGTACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGA 13764 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGG 114324 ||||| ||||| ||||| ||||||||| || | | |||| |||||||| Sbjct 13765 GGAATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGG 13816 >seq439 Length=37054 Score = 129 bits (142), Expect = 5e-25 Identities = 131/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211 |||||| ||||| || | | ||| || || | |||||||| ||||||||||||||||| Sbjct 23604 AATACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATC 23545 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 |||| |||||| ||||| ||||||||||| ||| | |||||||| ||||| || || Sbjct 23544 ACTCAAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGG 23485 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTC 114322 ||| || ||||| || || |||||||| || | | |||| |||||| Sbjct 23484 AGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTC 23434 >seq175 Length=68572 Score = 127 bits (140), Expect = 2e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | |||||||| ||||||||||||||||| Sbjct 14553 ATACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCA 14494 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| ||||| ||||||||||| ||| | |||||||| ||||| || ||| Sbjct 14493 CTCAAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGA 14434 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTC 114322 || || ||||| || || |||||||| || | | |||| |||||| Sbjct 14433 GGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTC 14384 >seq83 Length=96909 Score = 89.7 bits (98), Expect = 4e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 ||||| ||||||||||| || |||| ||||| |||||||| |||||||| ||||| ||| Sbjct 41958 TCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTG 42017 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGG 114324 || ||||||||| || | | |||| |||||||| Sbjct 42018 TCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGG 42054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420126442917048