Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq686 141 9e-29 seq71 120 3e-22 seq291 104 2e-17 seq769 100 3e-16 seq439 98.7 1e-15 seq175 98.7 1e-15 seq815 93.3 4e-14 >seq686 Length=24674 Score = 141 bits (156), Expect = 9e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | ||| || | |||| || ||||||||||||||||| ||||| Sbjct 10776 ACCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACT 10717 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || ||||||| || || || || || ||||||| || || ||||| ||||| Sbjct 10716 CAAAGTACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGG 10657 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || |||||||| ||| || | ||||| | || || Sbjct 10656 GATACCTTCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCAAC 10597 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| ||| | ||||||||||| | ||| |||||||| ||||||||||| Sbjct 10596 TTCTAAAGTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTT 10546 >seq71 Length=102704 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| |||||||| || | || || | || ||||| || Sbjct 21504 TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCAAGTTGT 21563 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| | || || | ||| ||||| ||||| || ||||| || ||||| || ||| Sbjct 21564 TTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTT 21623 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||| ||| || | ||||| | || ||||||| ||| | ||||||||||| Sbjct 21624 TGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTGCCGGTA 21683 Query 64421 AAAGTTTTTACGAAAATTTGCATTTT 64446 | ||| |||||||| ||||||||||| Sbjct 21684 AGAGTCTTTACGAAGATTTGCATTTT 21709 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| |||||||| || | || || | || ||||||||| Sbjct 21276 TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGGCCATCCTCAAGCTGC 21335 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 |||||||| ||||||| || || ||||| |||||||| ||||| || ||||| || ||| Sbjct 21336 TTGCCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCTTGGATCTTT 21395 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||| ||| || | ||||| || || || || | || | |||||| || || Sbjct 21396 TGCTTGACATTTTCAATACTATCAGAGGACTCAACCTCCAAGGTAATGGTCTTACCAGTG 21455 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | ||| || || || |||||||| Sbjct 21456 AGAGTCTTGACAAAGATTTGCAT 21478 >seq291 Length=50391 Score = 104 bits (114), Expect = 2e-17 Identities = 358/548 (65%), Gaps = 23/548 (4%) Strand=Plus/Minus Query 154905 ACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGC-CT--TT 154961 || || | ||| || | ||| || ||||| | ||| || |||| |||||| || || || Sbjct 27640 ACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGATCACGAGCTCTGATT 27581 Query 154962 TTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAA--TCATATATGTCGGCGTGCC 155019 | ||||| | | | |||||| || || ||||| | | | ||||| || |||| Sbjct 27580 TCGTCTTTACCAAAGTTTTTTCGC----AAGTCTAAAAAGGTGAAA-ATGTCTGCATGCC 27526 Query 155020 ACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTTT---CCTCCTTGATCCACGTGAC 155076 | || || || || | || | ||||| || || || |||||||| || | || Sbjct 27525 AGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACATAAC 27466 Query 155077 GCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGC 155136 | | ||| ||| | || || | || || | ||| ||| |||||||||| Sbjct 27465 GAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAGTAACCGTTGGTGC 27406 Query 155137 C----ACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCC- 155191 | | |||| | | || | |||||| || |||| || | ||| | ||| || Sbjct 27405 CGGCAATGTAT---GAT-CCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCT 27350 Query 155192 GCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTC 155251 || || || || ||||| |||||| | || || || || |||| ||| || Sbjct 27349 GCTGTCTTG-GAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATC 27291 Query 155252 TTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAA 155311 ||| |||| || | ||||||||| ||||| | ||| || |||| ||| || ||| Sbjct 27290 TTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAA 27231 Query 155312 TAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGC 155371 || ||||||||||||||||| || ||| | || | |||||||| || || || || Sbjct 27230 TAGAGTAGGACTAGCGTGTGTGAAGTATTTTTCGGACATCAAGTTGTATGTCTCAATAGC 27171 Query 155372 GGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCG 155431 || ||||| || || || |||||||| || || ||||| | || |||||| || Sbjct 27170 TGCATCAATATCGGTTCCATGGATACCGATTGCAACACGCATGATCAAATGTTGAGGACG 27111 Query 155432 CTCCGCAA 155439 || |||| Sbjct 27110 TTCAGCAA 27103 >seq769 Length=21522 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||||||||| || || | ||| || | ||||| || || Sbjct 14271 TGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCTTCGAGTTGT 14212 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| | ||||| || || || || |||||||| ||||| || ||||| || ||| Sbjct 14211 TTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTT 14152 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 || |||||| || | || ||| | || ||||||| ||| | ||||| || || Sbjct 14151 TGTTTTACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTCTTTCCAGTA 14092 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || || || |||||||| Sbjct 14091 AGTGTCTTGACAAAGATTTGCAT 14069 >seq439 Length=37054 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||||||||||||||| | ||| || ||||||| || || Sbjct 23576 TGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTGT 23517 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| ||||||| || || || || ||||| || ||||| || ||||| || ||| Sbjct 23516 TTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTTT 23457 Query 64361 TGCTTTACA 64369 ||||| ||| Sbjct 23456 TGCTTGACA 23448 >seq175 Length=68572 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||||||||||||||| | ||| || ||||||| || || Sbjct 14526 TGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTGT 14467 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| ||||||| || || || || ||||| || ||||| || ||||| || ||| Sbjct 14466 TTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTTT 14407 Query 64361 TGCTTTACA 64369 ||||| ||| Sbjct 14406 TGCTTGACA 14398 >seq815 Length=19846 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 155226 GTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAAT 155285 || || || || |||| ||| ||||| |||| || | |||||| || ||||| | | Sbjct 17313 GTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATT 17372 Query 155286 TGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTG 155345 || || |||| ||| || |||||| |||||||||||||||||||| | | | Sbjct 17373 TGGGGACGAGGTGTGCCTGCATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCA 17432 Query 155346 GCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCC 155405 | | |||||||| || || || || || ||||| || || || |||||||| || Sbjct 17433 GACATCAAGTTGTATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATTGCA 17492 Query 155406 ACGCGCATCAGCATGTGTTGAATGCGCTCCGCAA 155439 || ||||| | || |||||| || || |||| Sbjct 17493 ACACGCATGATCAAATGTTGAGGACGTTCAGCAA 17526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499635094399760